Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq886 116 2e-20
seq458 93.3 3e-13
>seq886
Length=31666
Score = 116 bits (128), Expect = 2e-20
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| || |||||||| ||| ||| || || || || || || || ||
Sbjct 10413 ACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGT 10472
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | ||||||||||||||||||||||| || || || || || |||||||| || ||
Sbjct 10473 TCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCC 10532
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||||| |||||||| || ||| || || ||||| | | | || ||||
Sbjct 10533 CTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAA-CCTCAA 10591
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
|||| || || || || ||||| ||||| ||||
Sbjct 10592 GGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 10624
Score = 111 bits (122), Expect = 1e-18
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || | || || ||| ||| || | || || || | |||||
Sbjct 10185 ACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGT 10244
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | ||| ||||||||||| ||||| || || || || |||||||| || ||||| ||
Sbjct 10245 TCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACC 10304
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||||||||| ||||| || ||| ||||| ||||| | || | | ||| |
Sbjct 10305 CTCCTTGTCTTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGA-CTTCCA 10363
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || || ||||| ||||| |||||
Sbjct 10364 GAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTG 10403
>seq458
Length=40226
Score = 93.3 bits (102), Expect = 3e-13
Identities = 441/688 (64%), Gaps = 27/688 (4%)
Strand=Plus/Plus
Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTA 475544
||||||| ||||||||||||||||||| |||||| | ||||| ||| || |||| ||
Sbjct 20744 GACGTCTCCGAACTGCTTGTGAACGTGCCAAGCGAACACTTTCCTCTTCTGCTCAGACCT 20803
Query 475545 CTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCT 475603
|| | || | || ||||| || || || ||||| || || ||| ||| || | |||
Sbjct 20804 CTATCGAGATCGACTCTCTCTTCGAGGGTATTGACTTCTACACCTC-TATCACCCGTGCT 20862
Query 475604 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTT 475663
|| || || | || |||||||| || || || | ||||| || | ||
Sbjct 20863 CGTTTCGAGGAGCTCTGCCAGGATCTCTTCCGATCCACCATCCAGCCCGTCGACCGTGTC 20922
Query 475664 CTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCA 475723
|||| || | || | ||||| || | ||||| || ||||| || || || || ||
Sbjct 20923 CTCACCGACGCCAAGATCGACAAGTCTCTTGTCCACGAGATTGTCCTCGTCGGTGGCTCT 20982
Query 475724 ACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCA-----TATTTTAATGGTAAAAAGT 475778
|| | ||||| | |||| || |||| | || || || || || ||
Sbjct 20983 ACCCGTATTCCCCGTGT-CCAGAA--GC--TCATTACCGACTACTTCAACGGAAAGGAGC 21037
Query 475779 TAAATGAAAGT--GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836
|| |||| | || |||||||| |||||||| || || || || ||||| || ||
Sbjct 21038 CCAA--CAAGTCCATCAACCCTGATGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCCGC 21095
Query 475837 TATTTTATCAGGTCAATCAGACGAGAAA--CTA--AATAATATTGTACTTGTTGACGTAA 475892
||| | || ||| || | || || | | || | || | ||| | || ||
Sbjct 21096 GATTCTCTCCGGT-GATACCTCCAGCAAGGCCACCAACGAGATCCTGCTTCTCGATGTCG 21154
Query 475893 CTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAA 475952
| || || || | ||| | || || | ||| || || ||||| || ||||| | | |
Sbjct 21155 CCCCCCTCTCTCTCGGTATCGAGACCGCTGGTGGTATGATGACCAAGCTTATCCCCCGCA 21214
Query 475953 ATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAA 476012
| || | ||||| || || || | || || ||||| | || || || || |
Sbjct 21215 ACACCACCATCCCCACAAAGAAGTCTGAGGTCTTCTCCACCTTCTCCGACAACCAGCCTG 21274
Query 476013 CTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT- 476071
||| ||||| ||| || ||||| | || |||||| | | ||||| |||
Sbjct 21275 GTGTTCTTATCCAGGTCTACGAGGGTGAGCGTCAACGCACTAAGG---ACAACAATCTTA 21331
Query 476072 --GGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAG 476129
|| | || | || ||||| || |||||||| | || ||||| || ||||| |
Sbjct 21332 TGGGCAAGTTCGAGCTCACTGGTATCCCCCCTGCTCCTCGTGGTGTTCCCCAGATTGAGG 21391
Query 476130 TTACTTTTGATATTGATGCAAATGGTAT 476157
| || || ||| ||||||| || |||||
Sbjct 21392 TCACCTTCGATCTTGATGCCAACGGTAT 21419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268076209460348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |