Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1021 111 2e-19 >seq1021 Length=26796 Score = 111 bits (122), Expect = 2e-19 Identities = 271/407 (67%), Gaps = 9/407 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | || || || || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 2590 ACAGCGATGGGGCCAACACCGGGACCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 2531 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || |||||||| ||||| |||||| ||||| || | ||||| | ||| || Sbjct 2530 AGGTTGAGATGACAGACATCAGCACCAATGTCACCAGGGCTGCAGAGACCAATCTGAGCG 2471 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || | || |||| || || || | | ||| | Sbjct 2470 TTCATGTTGGCACCGTCCATGTAGACAAGGCCGCCATGCTCGTGGACAAGATCACAGACT 2411 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || | || | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 2410 TGCTTAATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 2351 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 2350 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 2294 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||| ||| ||||| ||||| || |||||| | ||| |||||| Sbjct 2293 GTCTTGCCGTCACACTTCACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 2234 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 || || || || || || | || || ||||| || |||| ||||| Sbjct 2233 TTGGTACCGTGAGCAGAAACAGGGATAAGACAGACCTTTCGCTTATC 2187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578981022810520