Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1342 127 2e-23
seq179 123 3e-22
seq1076 109 7e-18
>seq1342
Length=9437
Score = 127 bits (140), Expect = 2e-23
Identities = 90/103 (87%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
||||||||||||||||||||||||| || || |||| ||||| | || ||||||||||
Sbjct 3601 CCAACTACCTCGACATCAAGCCTCTTCTTGACGTTGGCTGCAAAACCGTCGCCAACATGA 3660
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
||||||||||||| ||||||||||||||||| || || |||||
Sbjct 3661 TCAAGGGCAAGTCTCCCGAGGAGATCCGCAAAACTTTCAACAT 3703
>seq179
Length=39909
Score = 123 bits (136), Expect = 3e-22
Identities = 202/286 (71%), Gaps = 5/286 (2%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| |||| || || |||||||| || |||||
Sbjct 35471 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 35530
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||| | | ||| ||| ||| ||||| ||||| || || |||||
Sbjct 35531 CTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCCTCAACAGCAGCAAA 35590
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358
| | | ||| |||| |||||||| | || | ||| | | |||||| || |||||
Sbjct 35591 GGCAACGAGACGCTGGGCAAAGGAG--GA-GTCCTTATCCTGGATCCATCGGATGGCCCA 35647
Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTT 869417
||| ||||| || | | | || | || || |||||| ||||| | || | |
Sbjct 35648 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATATGTTC-GCT 35706
Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
||| || ||||||| ||||||||||| ||||| || ||||||||
Sbjct 35707 GGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTC 35752
Score = 104 bits (114), Expect = 3e-16
Identities = 176/252 (70%), Gaps = 5/252 (2%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || | || ||| |||||| |||||||||||||| | || |||||
Sbjct 35157 GCCTTCTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 35216
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808
|||||| | ||| ||||||| | ||||||| ||| ||| || ||||||
Sbjct 35217 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGA-- 35274
Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868
| || || || || ||||| ||||| |||||||| ||||||| | | |||||||||||
Sbjct 35275 CAAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGA 35334
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
||| || || || | ||| | | ||||| | ||| || |||||| || ||
Sbjct 35335 GGAGGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGA 35394
Query 868929 TGATCTGCCTGG 868940
|||| | |||||
Sbjct 35395 TGATAT-CCTGG 35405
>seq1076
Length=4255
Score = 109 bits (120), Expect = 7e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||| || || || |||| ||| ||||| || ||||| || || | || || ||
Sbjct 1613 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGA 1554
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || || | ||| | ||| | || || | |||| | | ||
Sbjct 1553 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACC 1494
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || ||| ||||||||| | || || ||||| || |||||||| |||||
Sbjct 1493 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 1434
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| |||| ||||||| || || | ||||| || || ||| || || | |||||
Sbjct 1433 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGCTGAGGAGTGCC 1374
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
||| ||||||||||||||
Sbjct 1373 GGCATTGAAGAGCGTGGG 1356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106942162696117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |