Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq886 98.7 9e-16
>seq886
Length=31666
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || || || || ||||| || ||||| || | ||
Sbjct 10406 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 10347
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||||||||| || || || || || ||||||
Sbjct 10346 GATACCATTGATAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCCCCGGATCAA 10287
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| || || || || || |||||| ||| | || || || |||
Sbjct 10286 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 10227
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || |||||||| || || ||||||||
Sbjct 10226 ATCCAGAAGGAATCTACTCTCCACTTGGT 10198
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || || || ||||| || || | ||
Sbjct 10916 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 10857
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || ||||| ||
Sbjct 10856 GACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 10797
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||| || ||||| || ||||| ||||| | | | || ||||| |||
Sbjct 10796 CAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 10737
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||| ||||| || || || || ||||
Sbjct 10736 ATTCAGAAGGAGTCCACTCTTCATCTTG 10709
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || ||| |||
Sbjct 10178 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACCATCACCCTTGAGGTCGAATCCAGT 10119
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || |||||
Sbjct 10118 GACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 10059
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||| ||| | | | || || || |||
Sbjct 10058 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAAC 9999
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | || | ||| | ||||| |||
Sbjct 9998 ATCCAGAAGGAGTCAACTCTTCACCTCGTTCTCCGACTTCGCGGCGGC 9951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449884097448280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |