Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq994 116 2e-21 seq886 116 2e-21 seq586 111 1e-19 >seq994 Length=39861 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 17465 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 17406 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || || |||||||| | || | ||||||||||| Sbjct 17405 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 17346 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 17345 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 17286 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || || |||||||| Sbjct 17285 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 17254 >seq886 Length=31666 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||||||||| ||||| ||||| | | |||| |||| Sbjct 9967 AGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCT 10026 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 10027 TCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCC 10086 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||| ||||| |||| ||| |||||| Sbjct 10087 TGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTC 10146 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| || ||||||||||| Sbjct 10147 TTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10178 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||||||||| || || || || |||| | || Sbjct 10705 AGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 10764 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| ||||||||||| | || | ||||||||||| Sbjct 10765 TCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 10824 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | ||| |||||| Sbjct 10825 TGAATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 10884 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || || | |||||| || |||||||||||||| Sbjct 10885 TTGCCGGTCAAGGTCTTGACGAAGATCTGCATGAT 10919 >seq586 Length=19764 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||||||||| || || | || |||| || || ||||| || ||||||| Sbjct 8615 CCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 8674 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||||||| || ||||| | || | |||||||||||| | || || ||||| Sbjct 8675 TCAGTCGCTGTTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 8734 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || || |||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct 8735 CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 8794 Query 34968 A 34968 | Sbjct 8795 A 8795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325683269516219