Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq458 156 3e-32
seq381 105 5e-17
>seq458
Length=40226
Score = 156 bits (172), Expect = 3e-32
Identities = 699/1100 (64%), Gaps = 13/1100 (1%)
Strand=Plus/Minus
Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439
||| ||||| ||| || ||||| ||| || || || |||| | || || |
Sbjct 21480 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 21421
Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499
||||| |||||||| | ||| || ||||| ||||| || || || || | |||||||
Sbjct 21420 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGAGGAGCAGG 21361
Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559
||||| || | | || | |||| | ||| || || |||||| || || ||
Sbjct 21360 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGATTGTTGTCCTTAGTGCGTTGACGCTC 21301
Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619
||||||| | | |||||| ||| ||| || || || || | || | || ||
Sbjct 21300 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 21241
Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
|| || || || || || ||||| | |||| |||||||| |||||||||||
Sbjct 21240 AGACTTCTTTGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 21181
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | ||| ||||| || || | |||||| | || | || | || | | ||
Sbjct 21180 GGTCTCGATACCGAGAGAGAGGGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 21121
Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796
| | || | ||| ||||| || || || | || ||||| || |||||||| ||
Sbjct 21120 GCTGGAGGTATCACCGGAGAGAATCGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 21061
Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856
|||||| || | | | || | | || || ||||| | | | || || | |||
Sbjct 21060 ATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTAATGAGCT-TCT 21002
Query 281857 -TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915
|| |||||||| | || || || || | ||||| || || || | || || |
Sbjct 21001 GGACACGGGGAATACGGGTAGAGCCACCGACGAGGACAATCTCGTGGACAAGAGACTTGT 20942
Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975
| | || | || | || || ||||| | | | || || | ||
Sbjct 20941 CGATCTTGGCGTCGGTGAGGACACGGTCGACGGGCTGGATGGTGGATCGGAAGAGATCCT 20882
Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 282035
|| || || ||||| ||| | || | || | | | ||||| || ||||| |
Sbjct 20881 GGCAGAGCTCCTCGAAACGAGCACGGGTGATAGAGGTGTAGAAGTCAATACCCTCGAAGA 20822
Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095
||| || | || || | || |||| ||||| || |||| || || ||||||||||
Sbjct 20821 GAGAGTCGATCTCGATAGAGGTCTGAGCAGAAGAGGAAAGTGTTCGCTTGGCACGTTCAC 20762
Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGATTCAAA--TCTGTTTTATAT 282151
| || || | || | ||| | || || || ||| | | || || | || ||
Sbjct 20761 AAGCAGTTCGGAGACGTCGCAGAGC----GCGGACGTTGGTGCTAAGGTCCTTCTTGAAT 20706
Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211
|| || ||||| || | || | | || ||||| || ||||| |||||||| |||
Sbjct 20705 TTCCTTTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTGTCAAAGTCTTCACCACCC 20646
Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271
|| | ||| | || | |||| | || | ||| | || || |||| | | |||
Sbjct 20645 AAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTAAGGAGA 20586
Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331
| ||||| || |||||||| | ||| || || || || || || ||
Sbjct 20585 GACACATCGAAAGTGCCACCACCAAGATCGAAGATCAGGACGTTGCGCTCGCCCTCAACC 20526
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || |||||||| || |||| || |||||||| ||||| || || |||| | |||
Sbjct 20525 TTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGTTCGTTGATGATTCGGAGAACG 20466
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|||||||| || || || ||||| || |||||||| | || |||||||| || ||
Sbjct 20465 TTAAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGTAG 20406
Query 282452 GCAGGAACAGTAATAACGGC 282471
||||| ||||||| ||||||
Sbjct 20405 GCAGGGACAGTAACAACGGC 20386
>seq381
Length=37442
Score = 105 bits (116), Expect = 5e-17
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| || || ||| || |||| || |||||||| ||||||||||| | || ||||||
Sbjct 30943 GGTAAGGAGGGCCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 31002
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || |||||| |||| | || || |||| |||| ||||||||||||| || ||||
Sbjct 31003 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACATGAGGTTGGTGTTCCTCGCAGTATT 31062
Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440
|| | | || || | ||||| |||||||
Sbjct 31063 GCCAGGACCCTCACCTACCCCGAAACTGTAACA 31095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740512521046626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |