Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 113 1e-19
>seq1076
Length=4255
Score = 113 bits (124), Expect = 1e-19
Identities = 358/548 (65%), Gaps = 9/548 (2%)
Strand=Plus/Plus
Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570
||||| | |||||||| | | | || || || || |||||| || || || |||
Sbjct 1389 CAATTATCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGGAATCTACGAT 1448
Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630
|||| || ||| | || || || | |||| || |||||| | | || ||
Sbjct 1449 ACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC 1508
Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690
|||||| | | || || | ||||| | || ||| | || | ||| |||||
Sbjct 1509 CGTATTCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCGAATGGTATTGTT 1568
Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GA 110747
|| ||| | | ||||||||| ||||||| ||||| | || ||||| || | ||
Sbjct 1569 CCTATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGA 1628
Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807
|| | ||||| ||||| ||||| |||||||| || ||| | || || ||| | ||
Sbjct 1629 CCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGATGTCTTCGATTTCCTGGAT 1688
Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867
|| ||||| || || || || || | || |||||| | || ||| | |||
Sbjct 1689 CTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGG 1748
Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927
|| | ||| | ||||||||||||||| || | || || ||| | || ||||| ||
Sbjct 1749 ATCCCTGATCTTTTCATGAAACGTGTTGAAAAGAACGGTGACTGGACACTGATGTG-CCC 1807
Query 110928 CATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAA 110986
|| || | ||||| || | || || ||| | ||||| || | || ||||||||
Sbjct 1808 CAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAA 1867
Query 110987 ATATGAAAAAGAAGGCAAGTTTCGCAA-ACAAATTCCA-GCTCAAGAACTTTGGTTCAAA 111044
|| || || || |||||| |||||| || | || | ||||| | ||||||| |
Sbjct 1868 GTACGAGAAGGAGGGCAAGGGTCGCAAGACCA--TCAAGGCTCAGAAGCTTTGGTACGCC 1925
Query 111045 ATCCTTGA 111052
|| |||||
Sbjct 1926 ATTCTTGA 1933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186776290300361
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |