Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1076 113 1e-19 >seq1076 Length=4255 Score = 113 bits (124), Expect = 1e-19 Identities = 358/548 (65%), Gaps = 9/548 (2%) Strand=Plus/Plus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||||| | |||||||| | | | || || || || |||||| || || || ||| Sbjct 1389 CAATTATCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGGAATCTACGAT 1448 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 |||| || ||| | || || || | |||| || |||||| | | || || Sbjct 1449 ACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC 1508 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 |||||| | | || || | ||||| | || ||| | || | ||| ||||| Sbjct 1509 CGTATTCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCGAATGGTATTGTT 1568 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GA 110747 || ||| | | ||||||||| ||||||| ||||| | || ||||| || | || Sbjct 1569 CCTATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGA 1628 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | ||||| ||||| ||||| |||||||| || ||| | || || ||| | || Sbjct 1629 CCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGATGTCTTCGATTTCCTGGAT 1688 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 || ||||| || || || || || | || |||||| | || ||| | ||| Sbjct 1689 CTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGG 1748 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 || | ||| | ||||||||||||||| || | || || ||| | || ||||| || Sbjct 1749 ATCCCTGATCTTTTCATGAAACGTGTTGAAAAGAACGGTGACTGGACACTGATGTG-CCC 1807 Query 110928 CATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAA 110986 || || | ||||| || | || || ||| | ||||| || | || |||||||| Sbjct 1808 CAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAA 1867 Query 110987 ATATGAAAAAGAAGGCAAGTTTCGCAA-ACAAATTCCA-GCTCAAGAACTTTGGTTCAAA 111044 || || || || |||||| |||||| || | || | ||||| | ||||||| | Sbjct 1868 GTACGAGAAGGAGGGCAAGGGTCGCAAGACCA--TCAAGGCTCAGAAGCTTTGGTACGCC 1925 Query 111045 ATCCTTGA 111052 || ||||| Sbjct 1926 ATTCTTGA 1933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186776290300361