Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq179 192 8e-43
seq1076 105 1e-16
>seq179
Length=39909
Score = 192 bits (212), Expect = 8e-43
Identities = 356/510 (70%), Gaps = 18/510 (4%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||| ||||| ||||| ||||| || |||||| | || |
Sbjct 36008 GATTTGGCAAATGTAC-AAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATC 35950
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| ||||| ||| ||| | || |||| |||
Sbjct 35949 TCTCCAAGGATCTTCACG----ACTGGAACAACCGCCTGACTGCTGATGAGCAGTTCTTC 35894
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
|| ||| |||| || ||| ||||| ||| ||||| ||||| ||||||||| |
Sbjct 35893 GTCTCTCACATCCTTGC-TTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGT 35835
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| || || | |||||||| | || ||||| |||| || ||||| ||||||||
Sbjct 35834 CGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGAT 35775
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||| ||||| || |||||||| ||||| |||||||||||| |||||||
Sbjct 35774 CATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGA 35715
Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126
|| | | || | || | ||||| |||||| || || | || | | | || |
Sbjct 35714 GCCCGCCCAG-CGAACATATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGA 35656
Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
|||| |||||||| || |||||| | | | || ||| | ||||||| |||| ||
Sbjct 35655 AGGCTGACTGGGCCATCCGATGGATCCAGGA-TAAGGACTCCTC-CTTTGCCCAGCGTCT 35598
Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245
||| | |||||| || || ||||| ||||| ||| ||| ||| | | ||||| ||
Sbjct 35597 CGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTG 35538
Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||||||||||| || |||||||| |||||
Sbjct 35537 GCTCAAGAAGCGTGGTCTCATGCCTGGTCT 35508
>seq1076
Length=4255
Score = 105 bits (116), Expect = 1e-16
Identities = 178/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||||||||| ||||||||||| || | || || || || ||||| || | ||
Sbjct 1356 CCCACGCTCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTGAT 1415
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||| || || |||||| || || | ||||||
Sbjct 1416 ATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCC 1475
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| ||| || || || ||| | | ||| | || || | ||| | ||| |
Sbjct 1476 AAGATGGCTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGGCTCATACATC 1535
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| || || || |||| || |||||||| || || ||| ||||
Sbjct 1536 GCCGGTACCAACGGTACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAACACT 1595
Query 260165 GCGCGCTACGTCGACCAG 260182
|| || || |||||||||
Sbjct 1596 GCTCGGTATGTCGACCAG 1613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177579619136962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |