Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq994 107 2e-18
seq886 104 2e-17
seq586 84.2 2e-11
>seq994
Length=39861
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || ||| || | || || |||||||| || |||||
Sbjct 17445 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 17386
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | || | || |||||||||| |||||| ||| | ||
Sbjct 17385 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 17327
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || |||||||| | |||||||| || ||||| | || || |
Sbjct 17326 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 17267
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 17266 CGAAAATCTGCAT 17254
>seq886
Length=31666
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| ||||| | |||||| |||| || || ||||| || |||||
Sbjct 10444 TCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCAAGTTGCTTTCCAGCAAAG 10503
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | ||| | || |||||||||| ||||| ||| | | |
Sbjct 10504 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTG 10563
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| ||| || ||||| | ||||| || || || || | || || ||
Sbjct 10564 TCGATGGTATCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 10623
Query 35726 AATAT 35730
| |||
Sbjct 10624 ACTAT 10628
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| | | || || |||| || |||||||| || || ||
Sbjct 10725 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 10784
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| || |||||||| | || | || |||||||||| ||||| ||| | ||
Sbjct 10785 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 10843
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || || ||||| | ||||| || || || ||||| || || |
Sbjct 10844 TGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGA 10903
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 10904 CGAAGATCTGCAT 10916
>seq586
Length=19764
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || ||||| || |||| | ||||| | || || ||||||||||| || || |
Sbjct 8615 CCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 8674
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||| ||||||| || | | |||||||||| |||||| ||| | | |
Sbjct 8675 TCAGTCGCTGTTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 8734
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | ||||| || || ||||| | ||||| || || ||||||| || ||||| |
Sbjct 8735 CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 8794
Query 35727 A 35727
|
Sbjct 8795 A 8795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450780070557080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |