Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 172 8e-38
seq179 95.1 2e-14
>seq1076
Length=4255
Score = 172 bits (190), Expect = 8e-38
Identities = 554/851 (65%), Gaps = 14/851 (2%)
Strand=Plus/Minus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || || || || | || || ||||| ||| ||||| |||||||| || || ||
Sbjct 2018 GATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 1959
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| | || || ||| |||| | || | ||| | | ||||| | ||| || ||
Sbjct 1958 TGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGAT 1899
Query 69471 TACGGTCTTGTAACGCTT---CTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCA 69525
||||||| || ||| ||| || || || | | ||| | |||| ||||| ||
Sbjct 1898 ---GGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCC--TCGAACTCC 1844
Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585
||||| | || | | ||||| || || || || ||||||| || ||| || |
Sbjct 1843 TCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCG 1784
Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTG 69645
| | | ||| |||||||| || ||||| || |||||||| || | || ||||| | |
Sbjct 1783 TTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGG 1724
Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705
| | || || || || || || ||||| || || || | | ||||||
Sbjct 1723 GCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAG 1664
Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765
||||| || || || || || || | | || ||||| || || || ||||| || |
Sbjct 1663 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACA 1604
Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825
|| | |||||||| || |||| | ||||| |||| ||||||||| ||| |||| ||
Sbjct 1603 TACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTG 1544
Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCT 69885
|| || | || || || | || |||||| | | |||||| || || ||
Sbjct 1543 GTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCA 1484
Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945
||||| || ||||| | ||||| || | || || || || ||||| || || ||
Sbjct 1483 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCG 1424
Query 69946 TCTATCATGTTAAG-AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004
|| |||| | || ||||| || | || | ||| | || ||| || ||||| ||
Sbjct 1423 TCCTTCATATCAACCAAGAAGCAAGAT-GATAATTGGGGCTGAGGAGTGCCGGCATTGAA 1365
Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGC 70064
| || || || || || ||||| | || ||| | |||||||||||| || | |
Sbjct 1364 GAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 1305
Query 70065 TGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTC 70123
| || ||||| ||| | || || | | |||||||| | ||| |||||||| |
Sbjct 1304 TCGCTCGATATCATCACCCCAG-ATACCAACAGACACACGCATGATCATGTGCTGAGGGC 1246
Query 70124 GTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAA 70183
| || || | ||| | ||||| | ||||||||| |||| ||| || || ||||
Sbjct 1245 GCTCGACAATCTTACCGTCAATTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAA 1186
Query 70184 AATAGTTGTAT 70194
| || | ||||
Sbjct 1185 AGTATTGGTAT 1175
>seq179
Length=39909
Score = 95.1 bits (104), Expect = 2e-14
Identities = 361/560 (64%), Gaps = 10/560 (2%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| |||||| || || ||||| || | | || | ||||| || || || ||
Sbjct 35450 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 35509
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||||||| ||||||||||| |||||||| || || | || || | ||| |||||
Sbjct 35510 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAA 35569
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TG 39792
||| || || || || ||||| ||||| || | || | | | || ||| ||
Sbjct 35570 GATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTG 35629
Query 39793 TATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851
||||| | || ||||| ||||| ||||| | || || || || || || || |
Sbjct 35630 GATCCATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 35688
Query 39852 TAAAGAGATAATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910
| ||||||| ||||| | | || || | || || || || | || ||
Sbjct 35689 TGAAGAGAT-ATGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAG 35747
Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970
| || || || ||||| || ||| ||||| || ||||| || || | || || |
Sbjct 35748 GTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGG 35807
Query 39971 ATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030
|| || ||||| || |||| || | | || || || || || |||||| ||
Sbjct 35808 ATCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCA 35867
Query 40031 GCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTC 40087
|| || || || | | || | || | | ||||| | |||| || |||
Sbjct 35868 GCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCAGCAGTCAGGCGGTTGTTC 35927
Query 40088 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCC 40147
||||| | | ||| || || | ||| | || ||||| ||||| || || ||||| |||
Sbjct 35928 CAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCC 35987
Query 40148 TTTTTGTACATGTTCCATAT 40167
|| |||||||| | ||| ||
Sbjct 35988 TTCTTGTACATTTGCCAAAT 36007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686888184149640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |