Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1076 210 3e-49 seq179 192 7e-44 seq444 82.4 9e-11 >seq1076 Length=4255 Score = 210 bits (232), Expect = 3e-49 Identities = 1096/1723 (64%), Gaps = 51/1723 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 3003 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 2944 Query 117865 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATG 117923 | |||||||| | | || | ||||| || | |||| | || || | |||| Sbjct 2943 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 2885 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 | ||||| ||||| ||||| |||||| || ||||| || ||||| | || Sbjct 2884 TGAATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 2825 Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 || | | ||| ||||| |||||| |||| || ||| | ||| | ||||| Sbjct 2824 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATG 2765 Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 2764 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 2705 Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 2704 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 2645 Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223 ||||| || | | |||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 2644 GCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 2585 Query 118224 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 118283 || || |||| || ||| || ||||| || || | ||| || |||||||||| || Sbjct 2584 AAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAGGAGCAGACTGTTACGGATGCCG 2525 Query 118284 TTTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341 | | | | | | | | || || ||| |||||||| || | | || | | Sbjct 2524 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 2467 Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401 |||||| ||||||||||||||||| | || || || || |||| || || || | Sbjct 2466 TCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGG 2407 Query 118402 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458 | ||||| ||| |||| | ||||| || |||||| |||||||| || || | Sbjct 2406 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAGATGGTCT 2350 Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 118517 |||| || | || | | |||||| || || || | | || || | | Sbjct 2349 CAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCA 2291 Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 | || |||| || || || || ||||| || ||||| || || || | ||| ||| Sbjct 2290 AGGAAAGCATCAGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 2231 Query 118578 TTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 118637 || ||||| || || || || ||| |||||| | | | || || || | Sbjct 2230 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 2171 Query 118638 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-AC 118696 ||||||| ||| | ||| | ||| | | | || | || || |||||| | | Sbjct 2170 ACAACCTGACTGACCTTATGCAACTTCTTGAAGTCGTA---GCAAG---CTTCATCGTAG 2117 Query 118697 ATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 118751 | | | | ||||| | || || || || || |||| | ||| || || Sbjct 2116 TTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCA 2057 Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 |||||| |||||||| ||||| | ||| || || ||||| || | ||||||||| Sbjct 2056 CAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGG 1997 Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871 || ||| ||| || ||||||||||| |||||| |||| | || ||||| || ||| Sbjct 1996 TTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGG 1937 Query 118872 GACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC---CC 118927 | || ||||| || | ||| | | || | ||| | ||| ||| | | || Sbjct 1936 GCCTCAAGAATGGCGTACCAAAGCTTCTG-AGC---CTTGATGGTCTTGCGACCCTTGCC 1881 Query 118928 CTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987 ||| | |||||||||| ||| || || || ||||| || || | || | ||| || Sbjct 1880 CTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCC 1821 Query 118988 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047 || || | ||||| | || | ||| | ||| || ||||| || |||||||| Sbjct 1820 AGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATGAA 1761 Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107 || || |||||||| || || ||| ||||| || || | || || | || || Sbjct 1760 AAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTG 1701 Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167 || ||| | |||| || || | || ||| | |||||| || || ||||| | || Sbjct 1700 GTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGC 1641 Query 119168 GATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAA 119221 | | || | ||| | | ||| |||||| ||||||| |||||| ||| || Sbjct 1640 AAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAA 1584 Query 119222 TACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGAC 119279 ||||||||||| |||| ||||||| ||| || || || || ||| || ||| | Sbjct 1583 GACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC 1524 Query 119280 TTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 119339 | | || | | | ||| | | | ||||||||| || ||| ||| ||||| Sbjct 1523 --AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCATG 1466 Query 119340 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 119399 || || | ||||| | ||||||| || || || ||| |||| | | | | | Sbjct 1465 GCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAG 1406 Query 119400 AAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGG 119459 ||||| || | ||| ||| || || || || |||||||| || || | || || Sbjct 1405 AAGCAAGATGATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1346 Query 119460 ATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500 ||| | | |||| |||||| | ||| ||||||||||| Sbjct 1345 GTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 1305 >seq179 Length=39909 Score = 192 bits (212), Expect = 7e-44 Identities = 539/814 (66%), Gaps = 19/814 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 35166 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 35225 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | |||| |||||||| Sbjct 35226 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACAAGGAGACG 35284 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| ||| || |||||||| |||| |||| ||| Sbjct 35285 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCACA 35344 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || || |||| ||| ||||||| || || || | ||| | || Sbjct 35345 GGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATATCCTG 35404 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 || ||| | | | || | | ||| | || | || ||| || |||||| || Sbjct 35405 GATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 35461 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || |||||| |||||| |||||||| Sbjct 35462 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAG 35521 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | |||||| || | || | |||| ||||||||| ||||| || Sbjct 35522 ACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCCTCAAC 35581 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203 | || || |||| |||||||| ||||||||| | ||| | | ||| || Sbjct 35582 AGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGAT 35641 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263 ||||| | ||||| || ||| || || | ||||| || || | ||||| | | Sbjct 35642 GGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGAT--AT 35699 Query 130264 CTTTTCT--GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGG 130321 || || | || || |||||||| | || ||||| || || || ||| || Sbjct 35700 GTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGA 35759 Query 130322 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 130380 | | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 35760 ATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTC 35818 Query 130381 ATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 130439 | | ||| | | || ||||| || || ||||| || |||| || || | Sbjct 35819 -GCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAAG 35877 Query 130440 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 130496 | ||||| | | ||| ||| |||| | ||| || | |||||||||| || Sbjct 35878 CAAGGATGTGAGAGACGAAGAACTGCTCATCAGCAGTCAGGCGGTTGTTCCAGTCGTGAA 35937 Query 130497 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||||| |||||||| | |||||| |||||||| Sbjct 35938 GATCCTTGGAGAGATCAATCTCCTCAGCAGTCCA 35971 >seq444 Length=89933 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 180879 CAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTT 180938 || |||||||||||| || ||||| |||||||| || |||||| || ||| ||| |||| Sbjct 56063 CAGCTTGGCACCGTAACCGTTGCGACCACCAACGGTTTTCTTCTCGTCGTCGTCGAAGTT 56122 Query 180939 TGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTG 180998 | || || | || || || ||| |||| || ||| | | || | |||||||||||| Sbjct 56123 GGAACCCGCCAACAGATGTCCGAAGATAAGCTCAGGAATGTAGATCTTCTCCTTTTCGTG 56182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618416639213560