Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq179 152 6e-32 seq596 113 5e-20 >seq179 Length=39909 Score = 152 bits (168), Expect = 6e-32 Identities = 181/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| || || | |||||| || || ||||| || Sbjct 35695 CTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGA 35636 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | | || | | | | ||||||| |||| ||| | || ||||| |||||| Sbjct 35635 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGA 35577 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||| ||| ||||| | |||| | |||||||||||||| |||||||| Sbjct 35576 GGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 35517 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| ||||| ||||||||||||||| ||||||||||||||||| || ||| || || Sbjct 35516 GCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTT 35457 Query 94953 TGC 94955 ||| Sbjct 35456 TGC 35454 >seq596 Length=62605 Score = 113 bits (124), Expect = 5e-20 Identities = 229/332 (69%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 9752 ||| | |||||||| ||| || ||||| || ||| || || ||| |||| || || | Sbjct 9807 TCCAATGGCATCAAGCTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 9750 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | ||||| || || || |||||||| || ||||||||||| ||||| |||| | | Sbjct 9749 GTG--AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 9693 Query 9813 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 9692 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 9633 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 9931 |||||||| ||||| || ||| | |||||| |||| || | || || ||| Sbjct 9632 GTCTTACCAGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 9573 Query 9932 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCG 9991 | | | | || || | ||| ||||| || |||| ||||| | || |||||||| Sbjct 9572 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 9513 Query 9992 GCGTCAATCCCCTCAACATCGGTAAACCGGGT 10023 ||||| || | ||||||| | ||||| || Sbjct 9512 TCGTCACAACCATGAACATCGTTGAACCGAGT 9481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583243294885240