Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 230 3e-55
seq179 105 7e-18
seq444 93.3 5e-14
>seq1076
Length=4255
Score = 230 bits (254), Expect = 3e-55
Identities = 524/778 (67%), Gaps = 28/778 (4%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239
|||||| | | ||||||| || | | |||||| ||||| || | ||| |||
Sbjct 1248 CCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGTC 1307
Query 53240 CGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296
||||| ||| | | ||| ||| |||| ||| ||||| || | || || ||
Sbjct 1308 TTGGAGACATACAATCTGATGTCTAGC---AAGTTCTTCACGCATGCTTCCCCCACGCTC 1364
Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356
||||| || || || ||| || || | || |||||| |||| | ||||||||
Sbjct 1365 TTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTGATATGAAGGAC 1424
Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416
||| || || || |||||||| || |||||| |||||| ||||||||| | |
Sbjct 1425 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1484
Query 53417 GGTGGTATCGGTATCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474
|||||||| ||| | | ||| | | | | ||||| | ||| || ||| || |
Sbjct 1485 GGTGGTATTGGTCTAAATGTGCACCGTA--TTCGTGCTACTGGCTCATACATCGCCGGTA 1542
Query 53475 CGAACGG--CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCG 53532
| ||||| | ||| |||| || || |||||||| || |||||||||||||| || ||
Sbjct 1543 CCAACGGTACATCGA--ATGGTATTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1600
Query 53533 GTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTG 53592
||| ||| |||||||||| ||||| || | || ||||||||||||||||| ||
Sbjct 1601 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1660
Query 53593 GCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCG 53652
|||| | || | | || || || || || ||| ||| || ||| | || ||| | ||
Sbjct 1661 GCACTCTGATGTCTTCGATTTCCTGGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 1720
Query 53653 CTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAA 53712
|||||| || || || || ||||| || || || |||||| || || || ||
Sbjct 1721 TGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACGTGTTGAAAA 1780
Query 53713 GGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACG 53771
| ||| || ||| ||||||||||| ||||||||||| |||||| | | || |||||
Sbjct 1781 GAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTG-CTACG 1839
Query 53772 GTGAGGAGTTTAACGAGATGTATCGGACGTAC-----GCAGTTC-AGGGCCGCTACAAGA 53825
| |||||||| | | |||| | |||| | || | |||| ||| |
Sbjct 1840 GAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC------A 1893
Query 53826 AGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAA 53885
||| ||||||| | || | ||| | || || || || |||| ||||| ||||
Sbjct 1894 AGACCATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAA 1953
Query 53886 CGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|| | |||| |||||||||| | |||| ||||||||||| |||||| ||||
Sbjct 1954 ACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGG 2011
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
||||||||| ||||| | ||| || ||||||||||| |||||||| |||| || | ||
Sbjct 2837 TGCTGATCGAGGTGCCTTCATTGATCAGTCCCAGTCACTGAACATTCACATGAAGGACCC 2896
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| ||| |||| | | | ||||||||| || |||||| || |||||||| ||
Sbjct 2897 CACGATGGGCAAGATCACCAGTATGCACTTTGCAGGCTGGAAGCTTGGCCTCAAGACCGG 2956
Query 55906 TATGTACTATCTGCGGAC 55923
|||||||| || || ||
Sbjct 2957 CATGTACTACCTTCGTAC 2974
>seq179
Length=39909
Score = 105 bits (116), Expect = 7e-18
Identities = 532/826 (64%), Gaps = 40/826 (5%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| ||| | || ||||| || || ||||||||||| || | | ||||||||||||||
Sbjct 35166 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 35225
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTGCCATG-AGG 74579
||||||| ||||| | || ||| | |||||| | || | | || | ||
Sbjct 35226 AAGTCGAAGGGGTTGGTGGCCTTGTAGAC---CTTCTCGTTGCCAAGAGCGACAAGGAGA 35282
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
||||| || || || | |||||||||| |||| | | | |||||||| |||
Sbjct 35283 CGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCA 35342
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC-CATTGGACA-ATCT 74697
|| || || || ||||||| ||||| ||| | | || || || | |||
Sbjct 35343 CAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATATCC 35402
Query 74698 TGTGAATGTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAAC 74756
|| || ||| | ||||| || | |||||||||| || | || ||||||
Sbjct 35403 TG-GATCATCTGCTTACTGGCACGAC-CCTTGAGGTGAGAGTGGAGGAGGCA-GGCAAAG 35459
Query 74757 TCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATA 74816
|| || || || || | || | || || || || | || ||||||||
Sbjct 35460 TCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATG 35519
Query 74817 AGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCG 74876
|| ||||||||||| | ||| ||||| | ||||| |||||||||||||| || ||
Sbjct 35520 AGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCCTCA 35579
Query 74877 ACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC---ATCCAAGTC 74933
||| |||||||| || || || || || || | | || | | ||||| ||
Sbjct 35580 ACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCA--TC 35637
Query 74934 TGA--GCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGG 74990
|| ||||| ||||| ||| || | |||||| | || || || || | ||||||
Sbjct 35638 GGATGGCCCAGTCAGC-CTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGA 35696
Query 74991 CTTGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCG 75048
|| ||| || |||| ||||||| | |||| || | || ||||| ||||| |
Sbjct 35697 TATG--TTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGG 35754
Query 75049 AATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTA 75108
| ||||| ||| | | |||| | ||||||| | || ||||| | ||||| |
Sbjct 35755 AGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGA 35814
Query 75109 CAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAA 75166
| | || |||| || | ||| ||||| ||||||| || || ||||| |||||
Sbjct 35815 CCTCGCCACTGAATCGCTC--GACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAA 35872
Query 75167 AAAAGCCAGTACCATTTTGATA----AAGTGGCGCTCATCGTCAGT---GAGTTTGTCCC 75219
||||| || | | ||| | ||| ||||||| |||| | | |||| ||
Sbjct 35873 GAAAGCAAGGA----TGTGAGAGACGAAGAACTGCTCATCAGCAGTCAGGCGGTTGTTCC 35928
Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
| || | || ||| | | |||||||||||| | ||||||||
Sbjct 35929 AGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAA 35974
>seq444
Length=89933
Score = 93.3 bits (102), Expect = 5e-14
Identities = 267/405 (66%), Gaps = 8/405 (2%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| ||||| ||||| || |||||||||||||||| ||| || | || || || || | |
Sbjct 53997 CCTGTACCAATGCCATCGGCACCGTTGACCAGAACCATGGGGAGGATTGGAGCATATACC 54056
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTG-TCAGCC-- 151992
||||| | | | ||||| || || | | | || | || | | ||| ||
Sbjct 54057 ATTGGCTCGATTTTCTTGCCGTCTTC-ATAATGA--TGCATCA-GGTTTGGCTCATCCAT 54112
Query 151993 -GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGC 152051
|| | ||| ||| || | | ||| || ||| |||||| |||| || | |||||
Sbjct 54113 GGGGTGGAAGATCTTGCGGGCGAATGGAGACAGACGAGTGAAGGTGTAACGAGGACTGGC 54172
Query 152052 CGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111
||||| ||||| || || || | || || | |||| ||| || || |||||
Sbjct 54173 AGCATCAGATCCACCGGCAAGTCGAGAACCGAAGTTTCCACTGGGTTCCAGACAGTTGAT 54232
Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTC 152171
|||||| | || ||||| ||||| |||| | || || || ||| | |||
Sbjct 54233 GTTGTTTGAACCTACGAAGTTCTGGGCCAGGCCAATGATAGTCTGTTGGAGAGACTGTTC 54292
Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231
||||||||| || || |||||||| | || || || ||||| | | |||||| ||||
Sbjct 54293 ACCGTGGTGGTAGGCAGTCTGCTCAGAGACATAACCAGCCAATTCAACGACCTTCTTGTC 54352
Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276
| | ||| |||||| ||||| || || ||||| |||||
Sbjct 54353 TTTGACGATGTTTCTCTTGAAGCAGGCATATATGACCTTACGCTG 54397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547199576679800
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