Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 196 7e-45
>seq1076
Length=4255
Score = 196 bits (216), Expect = 7e-45
Identities = 439/652 (67%), Gaps = 8/652 (1%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|||||||| || || |||||||||| || ||||||||| | | | ||| ||||||||
Sbjct 1822 CCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATG 1763
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|| |||||||| ||||| || |||| || ||||| |||| | || || || ||
Sbjct 1762 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCG 1703
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| ||||| || || || | | |||||| ||||| || || || || ||
Sbjct 1702 TGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 1643
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | | || ||||| || || || ||||| || | ||| | || ||||| || |
Sbjct 1642 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1583
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| |||| |||||| || ||||| || || || || | || || |||
Sbjct 1582 ACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1523
Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
| || |||||| | | || | | || || || || |||||||| || || | |
Sbjct 1522 GTAGCACGAATACGGTGCACATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGG 1465
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAG-AAGA 78371
| || || | ||||||||||| ||||| |||||||| ||| |||| | || ||||
Sbjct 1464 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA 1405
Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431
| || | || | ||| | ||| ||| || ||||| || | || || || ||||||
Sbjct 1404 AGCAAGAT-GATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1346
Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTG 78490
|| || | || ||| | ||||||||||| || | || || || || ||
Sbjct 1345 GTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCC 1286
Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550
| || || || | |||||||| | ||| |||||||| | || || ||||| |
Sbjct 1285 CAG-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTC 1227
Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602
||||| | | ||||||| |||||||| || || ||||| || | ||||
Sbjct 1226 AATTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 1175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694647951252640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |