Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 221 2e-52
>seq1076
Length=4255
Score = 221 bits (244), Expect = 2e-52
Identities = 442/650 (68%), Gaps = 4/650 (1%)
Strand=Plus/Minus
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609
||||| || || || || ||||||| || ||| ||||| | | | ||| ||||||||
Sbjct 1822 CCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATG 1763
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
|| |||||||| ||||| || |||| || ||||| |||| | || || || ||
Sbjct 1762 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCG 1703
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
||||| ||||| ||||| || | | |||||| ||||| || || || || ||
Sbjct 1702 TGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 1643
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | | |||| ||||| || || || ||||| || | ||| | |||||||| || |
Sbjct 1642 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1583
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|| | | ||| |||| ||| || || |||||||| || || || | || || |||
Sbjct 1582 ACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1523
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
||||||||| | | ||| || || || || ||||| || ||||| | |||
Sbjct 1522 GTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 1463
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG-AAGAAA 76968
||| || | || || ||||| ||||| ||||| || ||| |||| | || |||||
Sbjct 1462 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 1403
Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028
|| | || | ||| | ||| ||| || ||||| || | || || || ||||| ||
Sbjct 1402 CAAGAT-GATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGT 1344
Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGAT 77087
||| | || ||| | ||||||||||| || | ||| || ||||| ||
Sbjct 1343 GAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCA 1284
Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147
| || || |||| |||||||| | ||| |||||||| || || ||| ||||| | |
Sbjct 1283 G-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAA 1225
Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197
|||| | | ||||||| |||||||| || || ||||| || | ||||
Sbjct 1224 TTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 1175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712913003056320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |