Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1076 221 2e-52 >seq1076 Length=4255 Score = 221 bits (244), Expect = 2e-52 Identities = 442/650 (68%), Gaps = 4/650 (1%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 ||||| || || || || ||||||| || ||| ||||| | | | ||| |||||||| Sbjct 1822 CCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATG 1763 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || |||||||| ||||| || |||| || ||||| |||| | || || || || Sbjct 1762 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCG 1703 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| ||||| ||||| || | | |||||| ||||| || || || || || Sbjct 1702 TGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 1643 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | |||| ||||| || || || ||||| || | ||| | |||||||| || | Sbjct 1642 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1583 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | | ||| |||| ||| || || |||||||| || || || | || || ||| Sbjct 1582 ACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1523 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||||||| | | ||| || || || || ||||| || ||||| | ||| Sbjct 1522 GTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 1463 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG-AAGAAA 76968 ||| || | || || ||||| ||||| ||||| || ||| |||| | || ||||| Sbjct 1462 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 1403 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 || | || | ||| | ||| ||| || ||||| || | || || || ||||| || Sbjct 1402 CAAGAT-GATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGT 1344 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGAT 77087 ||| | || ||| | ||||||||||| || | ||| || ||||| || Sbjct 1343 GAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCA 1284 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | || || |||| |||||||| | ||| |||||||| || || ||| ||||| | | Sbjct 1283 G-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAA 1225 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 |||| | | ||||||| |||||||| || || ||||| || | |||| Sbjct 1224 TTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 1175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712913003056320