Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq886 123 6e-23
seq994 113 1e-19
seq586 98.7 2e-15
>seq886
Length=31666
Score = 123 bits (136), Expect = 6e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| |||||||||||||| || ||||| |||||||| ||||| | ||||
Sbjct 10416 GAGGCGGAGGACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCG 10475
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| || || ||||| || | ||||||||| | | ||| ||
Sbjct 10476 GCCGTCTTCAAGTTGCTTT--CCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCC 10533
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || ||||| || || ||| | || | | | || || ||| || |||||
Sbjct 10534 TCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAACCTCAAGG 10593
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
|| || || ||||| ||||| ||||| ||||
Sbjct 10594 GTGATGGTCTTGCCAGTGAGGGTCTTGACGA 10624
Score = 111 bits (122), Expect = 4e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||||||||| ||||| || || ||||||||||| | | ||| |
Sbjct 10698 GAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCG 10757
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|| || || || || |||||||| || |||| | |||||||| | | ||| || |
Sbjct 10758 GCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGT-TGCTGGTCGGGGGGGATGCCCT 10816
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || ||||| || ||||| | || | |||| ||| ||| || || || |
Sbjct 10817 CCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGG 10876
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| || | ||||| ||||||| ||||||
Sbjct 10877 TGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 10916
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || || ||||||||||| |||| | ||||| ||||| || |
Sbjct 10200 CAAG-TGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAA 10258
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| || | ||| || |||| | || || ||||| ||||| |
Sbjct 10259 GTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTTGGA 10318
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | || | | | || || ||| ||||| |||||||| || || |
Sbjct 10319 TCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTC 10378
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| ||||||| |||||
Sbjct 10379 CAGTAAGGGTCTTGACGAAGATTTGCAT 10406
Score = 104 bits (114), Expect = 5e-17
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| || || |||||||| ||||| || ||||||||||| ||| || || |
Sbjct 9961 AGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGA 10020
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| | || || ||||||||||| | |||||| || | | ||| || |||
Sbjct 10021 CCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCC 10080
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAG 152064
|| || ||||| || || || | || | ||| ||| | || || ||||| |
Sbjct 10081 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGA--TTCGACCTCAAGGG 10138
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || || || || ||||||||||||| ||||||
Sbjct 10139 TGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 10178
>seq994
Length=39861
Score = 113 bits (124), Expect = 1e-19
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || ||||| ||||| || ||||||||||| ||| | || |
Sbjct 17472 GAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 17413
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | ||||||||| | | ||| || ||
Sbjct 17412 GCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTC 17353
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || ||||| ||
Sbjct 17352 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 17293
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || || |||||||| ||||| ||||| | |||||| || ||
Sbjct 17292 GATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCC 17248
>seq586
Length=19764
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| |||||||| || |||| | ||||| ||||| || || || || ||||||||
Sbjct 8617 TTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 8676
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||| ||||||| | ||| || ||||| || || || || |||||| | ||
Sbjct 8677 AGTCGCTGTTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 8736
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || ||||| || || || |||||||| || |||||||||||
Sbjct 8737 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 8795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153785305227071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |