Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq423 82.4 6e-11 >seq423 Length=39909 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| || || || ||||| |||||||| || || ||| |||| || || || Sbjct 20741 CATCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTC 20800 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 ||||| | | || | || ||| || ||| | || || ||| | || || Sbjct 20801 TTCCGACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGA 20860 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 ||||||||| || || | || ||||| || || || || | ||| | ||||| Sbjct 20861 CCAGCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTA 20920 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCAT 25035 || ||| ||||| ||| |||| |||||| Sbjct 20921 CAACATTCAGAAGGAGTCCACTCTTCAT 20948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418294609336640