Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq413 145 2e-29 seq701 100 6e-16 >seq413 Length=40179 Score = 145 bits (160), Expect = 2e-29 Identities = 299/443 (67%), Gaps = 15/443 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| ||||| || |||||||| ||||| || ||||| || || |||||| Sbjct 35596 GTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGG 35537 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||||||||| |||| |||||| ||| |||| ||| | ||| Sbjct 35536 CTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAC 35477 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTGAT 102091 || |||||||| |||||||| ||| | || | | |||||| || Sbjct 35476 GAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTCAAGGGTCGTG----- 35422 Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 ||| ||| | | ||| | || || ||||||| |||||| ||||| || || Sbjct 35421 ---CCAGTAAG-CAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAG 35366 Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 || ||||| | | || || | | | || ||||||| | | |||| ||| Sbjct 35365 TTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAG 35306 Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271 |||||||| || || || ||| || | || | | || || ||| ||| || Sbjct 35305 TACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAG 35246 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331 | |||||||||||| |||||||| || || ||||| | ||||||||||| || Sbjct 35245 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTC 35186 Query 102332 GAAAAGAGAGTCGCCGAGTATCA 102354 || ||| | || || || || || Sbjct 35185 GAGAAGCGTGTTGCTGACTACCA 35163 >seq701 Length=4748 Score = 100 bits (110), Expect = 6e-16 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||||||| || || ||| |||||||| || || |||||||| Sbjct 1652 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 1593 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GTTCCACA 94910 || || || | | | | | |||||| || || | |||||| ||| || || Sbjct 1592 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGC-TGAGGAGTGCCGGC 1534 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || |||||||||||||| || || | | || ||||| |||| ||||| || Sbjct 1533 ATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTC 1474 Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | ||| | ||| || | | || || | || |||| ||||||||| ||||||| || Sbjct 1473 CAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGATCATGTGCT 1415 Query 95030 GAGGGCGCTCAAC 95042 |||||||||| || Sbjct 1414 GAGGGCGCTCGAC 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989560645199110