Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq564 98.7 2e-16
seq157 89.7 8e-14
>seq564
Length=25355
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||||| | ||||| |||||||| || ||||||||||| |||||
Sbjct 11093 GCCAAGCGCCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 11151
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||| ||||| ||||||||| | ||||
Sbjct 11152 CCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATTTCTG 11192
>seq157
Length=94100
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| | |||| |||||| || || |||| ||| |
Sbjct 93654 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACG 93595
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || || || |||||||| || || ||||||||||||||| | || ||||||| |
Sbjct 93594 CTGTCACATACACTGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTCGTCTACG 93535
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || || |||| | || ||||| || |||||
Sbjct 93534 CCCTCAAGCGACAGGGACGTACTCTCTACGGTTTCGGTGGTTAA 93491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073515846506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |