Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq564 98.7 2e-16 seq157 89.7 8e-14 >seq564 Length=25355 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||||| | ||||| |||||||| || ||||||||||| ||||| Sbjct 11093 GCCAAGCGCCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 11151 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||| ||||| ||||||||| | |||| Sbjct 11152 CCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATTTCTG 11192 >seq157 Length=94100 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| |||| | |||| |||||| || || |||| ||| | Sbjct 93654 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACG 93595 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || || || |||||||| || || ||||||||||||||| | || ||||||| | Sbjct 93594 CTGTCACATACACTGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTCGTCTACG 93535 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || || || || |||| | || ||||| || ||||| Sbjct 93534 CCCTCAAGCGACAGGGACGTACTCTCTACGGTTTCGGTGGTTAA 93491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073515846506