Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq701 95.1 1e-14 seq133 87.8 2e-12 >seq701 Length=4748 Score = 95.1 bits (104), Expect = 1e-14 Identities = 332/510 (65%), Gaps = 19/510 (4%) Strand=Plus/Minus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 |||||| || |||||| |||||||| || ||||||| || | || ||||| ||| Sbjct 2049 CTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGC 1990 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCT 148354 | || || ||||||| ||||||||||| || ||| | | || ||||| || | Sbjct 1989 GAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGT---CACCGTTCTTTTCAACACG 1933 Query 148355 CTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC 148414 ||||| || |||||||| |||| | ||||| | |||||| || || | ||||| Sbjct 1932 TTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTC 1873 Query 148415 GGCACC---CATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471 ||| | || || |||||||| ||| || || || | |||||||||||| Sbjct 1872 CTTACCGTGGTTCTTACG---GAGATCCAAGAAATCGAAGACATCAGAGTGCCAAGGCTC 1816 Query 148472 GATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA- 148527 || ||| | || | || || | | | || || || || ||||||| || |||| Sbjct 1815 GAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCG-AGCAG 1757 Query 148528 TGCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAA 148587 || | || || ||||| | ||| | | || || || ||||| || | | Sbjct 1756 TGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGA 1697 Query 148588 TTTTACTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTGTTTA 148646 | | || || ||||| | ||| ||||| || || || || || | || Sbjct 1696 TGTATGAGCCAGTAGCACGAATACG-GTGCACATTTAGACCAATACCACCAGCCATCTTG 1638 Query 148647 GATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATG 148706 || ||||||||||| ||||| || | ||||| || | ||||||||| || | || Sbjct 1637 GAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATA 1578 Query 148707 TTAAGCAGGTAGCACGATGACATTTGAGGC 148736 | || || | |||| ||||| | ||| ||| Sbjct 1577 TCAACCAAGAAGCAAGATGATAATTGGGGC 1548 >seq133 Length=57550 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 40167 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 40108 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 40107 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 40048 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | ||||| || ||||| |||| | | | | |||||||| Sbjct 40047 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 39988 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| |||| |||||||| Sbjct 39987 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCT 39952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478651378798240