Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq701 95.1 1e-14
seq133 87.8 2e-12
>seq701
Length=4748
Score = 95.1 bits (104), Expect = 1e-14
Identities = 332/510 (65%), Gaps = 19/510 (4%)
Strand=Plus/Minus
Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297
|||||| || |||||| |||||||| || ||||||| || | || ||||| |||
Sbjct 2049 CTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGC 1990
Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCT 148354
| || || ||||||| ||||||||||| || ||| | | || ||||| || |
Sbjct 1989 GAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGT---CACCGTTCTTTTCAACACG 1933
Query 148355 CTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC 148414
||||| || |||||||| |||| | ||||| | |||||| || || | |||||
Sbjct 1932 TTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTC 1873
Query 148415 GGCACC---CATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471
||| | || || |||||||| ||| || || || | ||||||||||||
Sbjct 1872 CTTACCGTGGTTCTTACG---GAGATCCAAGAAATCGAAGACATCAGAGTGCCAAGGCTC 1816
Query 148472 GATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA- 148527
|| ||| | || | || || | | | || || || || ||||||| || ||||
Sbjct 1815 GAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCG-AGCAG 1757
Query 148528 TGCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAA 148587
|| | || || ||||| | ||| | | || || || ||||| || | |
Sbjct 1756 TGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGA 1697
Query 148588 TTTTACTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTGTTTA 148646
| | || || ||||| | ||| ||||| || || || || || | ||
Sbjct 1696 TGTATGAGCCAGTAGCACGAATACG-GTGCACATTTAGACCAATACCACCAGCCATCTTG 1638
Query 148647 GATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATG 148706
|| ||||||||||| ||||| || | ||||| || | ||||||||| || | ||
Sbjct 1637 GAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATA 1578
Query 148707 TTAAGCAGGTAGCACGATGACATTTGAGGC 148736
| || || | |||| ||||| | ||| |||
Sbjct 1577 TCAACCAAGAAGCAAGATGATAATTGGGGC 1548
>seq133
Length=57550
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || || || | || || || |||||||| | || | || ||
Sbjct 40167 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 40108
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|||||||||||| | ||||| ||||| ||||| || || || || |||||
Sbjct 40107 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 40048
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| || | ||||| | | ||||| || ||||| |||| | | | | ||||||||
Sbjct 40047 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 39988
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || ||| |||| ||||||||
Sbjct 39987 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCT 39952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478651378798240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |