Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq701 396 7e-105 >seq701 Length=4748 Score = 396 bits (438), Expect = 7e-105 Identities = 1125/1700 (66%), Gaps = 48/1700 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| | | | ||| | ||||| || ||||| || Sbjct 1357 AAGACTTTGGAGCGATCATACCTC-CTCAAAATTGACGGTAAGATTGTCGAGCGCCCTCA 1415 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 1416 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 1469 Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || ||||| || || |||| || || | |||||||| || | || || Sbjct 1470 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGC 1525 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | |||||| || |||| | | || || | || |||||||| | | | ||||||| Sbjct 1526 TCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTGATATGAAGG 1585 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| |||| || || || |||| ||||| | || ||||||| | Sbjct 1586 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1645 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || |||||| || | ||| | ||||||| || | | ||||| ||| Sbjct 1646 CTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 1704 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| |||||||| | ||||| ||||||||||| || |||| ||||| | Sbjct 1705 ACCAACGG-TACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1763 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||| |||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct 1764 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1823 Query 363867 TCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || | ||| | || || ||||||| | ||||| || ||| || || ||||| | | Sbjct 1824 GCACTCTGATGTCTTCGA-TTTCTTGGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCC 1882 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 |||| |||||||| ||| ||| |||||| | |||| | ||| ||||| || || || Sbjct 1883 GTGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACGTGTTGAA- 1941 Query 363986 CAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 | | | | | ||| |||| | ||||| |||| || || || || |||| | Sbjct 1942 -AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTA 2000 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 || || || | | ||||| ||||||||||| || |||||| |||| ||| ||||| Sbjct 2001 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGAC 2060 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 || || |||||||| |||| ||||| | || | |||| |||||| |||| || Sbjct 2061 CATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 2120 Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 | ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | Sbjct 2121 ATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA- 2179 Query 364224 TCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || | || |||||| || || || ||||| || ||| || || |||||| || | Sbjct 2180 TCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCTG 2239 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTG 364336 | || |||||||| || | | || || | || | | | |||| || | | Sbjct 2240 TCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTACG 2299 Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 || | || | | || | || | | || || | |||| || ||||| | |||| Sbjct 2300 ACTTCAAGAAGTTGCATAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCG 2359 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATT 364455 | ||| | || || ||| | || | || ||| ||||| || || || ||| Sbjct 2360 ATGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATT 2418 Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATT 364513 ||||||||||| |||||||| ||||| | ||| | ||||| ||| | || || | Sbjct 2419 GGTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAGT 2476 Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573 | || || ||||||| || || ||| |||||||||| || || ||| || || | | Sbjct 2477 CACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTATCACGCTGCCCTCA 2536 Query 364574 CTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 ||| || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 2537 CTGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCC 2595 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 || |||| | |||||||||| | ||||| |||| ||| |||| || ||| || Sbjct 2596 GCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGAC 2655 Query 364693 TGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCG 364752 ||||| || || || | || |||| || || | || ||| || | || Sbjct 2656 TGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTCGCT 2715 Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || ||||| || || ||| | ||||| | || ||||||||||||||||| || | Sbjct 2716 CCTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAGTGCTTCGAGCCCTAC 2775 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || |||| | || |||||| ||||| | || || || | ||| || || | Sbjct 2776 ACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTGG 2835 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || ||||||| ||| |||| || |||||| || ||||||||| ||||| Sbjct 2836 CTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCATT 2895 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 || | |||||||| | ||||||||||| | || | ||| | ||| || | ||| Sbjct 2896 GCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTAC 2955 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052 || || || ||||| || || ||| || || | ||||| || ||||| ||||| Sbjct 2956 AAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAGGTGCC 3015 Query 365053 TTTATCTGTCAGAGCCAGTC 365072 || || |||| |||||| Sbjct 3016 TTCATTGATCAGTCCCAGTC 3035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303322840040444