Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq701 188 7e-43 >seq701 Length=4748 Score = 188 bits (208), Expect = 7e-43 Identities = 940/1487 (63%), Gaps = 30/1487 (2%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || ||||| || || || || ||| || | || || || ||| || | Sbjct 1517 CCCCCACGCTCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTG 1576 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| |||| || ||||| | ||| | |||||| |||||| | |||| Sbjct 1577 ATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCT 1636 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTA 94073 | || || || || || || | | ||| ||| |||| ||||| | || || || Sbjct 1637 CCAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATA 1694 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| ||||||||| || || || || || | || |||||||| || ||||||||||| Sbjct 1695 CATCGCCGGTACCAACGGTACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAA 1754 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || || || ||||||||||| | | | ||| |||| || |||| || Sbjct 1755 CACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCT 1814 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||| |||||| | || || | |||| | || || || ||||||||||| || || Sbjct 1815 CGAGCCTTGGCACTCTGATGTCTTCGATTTCTTGGATCTCCGTAAGAACCACGGTAAGGA 1874 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | || || ||| || || ||| | || || ||||| |||||||| Sbjct 1875 GGAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACG 1934 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || || || ||| | ||||| || | || ||||| || || || || || |||| Sbjct 1935 TGTTGAAAAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGA 1994 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | | ||| | || || | |||| | ||||| | ||||||||| | Sbjct 1995 CTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCG 2054 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| || | ||| |||||| ||| | || | || | ||| ||||| || Sbjct 2055 CAAGACCATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGG 2114 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | |||||| | |||| |||| |||||| || ||||||| Sbjct 2115 AAACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGG 2174 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| || || ||||| || ||| ||||||| | | || |||||| | Sbjct 2175 TACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGT 2234 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 ||||| || ||||| | ||| | ||| || | ||| | | | |||| Sbjct 2235 CGCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GA 2285 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAAC 94731 | |||| | ||| | || || | || | | | ||| || | || ||| Sbjct 2286 TGAAGCTTGCTACGACTTCAAGAAGTTGCATAAGGT--CAGTCAGGTTGTTATTCGCAAC 2343 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 ||||||| | | ||||| |||| |||||| |||| |||||| ||| ||| || Sbjct 2344 CTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATG 2403 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || ||||| || | || || ||||| | || || || | | ||||| Sbjct 2404 CGCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTGCGT 2463 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||||| ||| || ||| || | | || | | || || || | ||| ||| Sbjct 2464 ATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTAT 2523 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971 ||| ||| | | ||||| || |||| | ||| | || || || | Sbjct 2524 CACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACC 2580 Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031 ||| || || ||| |||| || | ||||| ||| | ||| || |||||| Sbjct 2581 TTCAAGGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCC 2640 Query 95032 TCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAAC 95091 || | || | |||||||| |||| || | || || | | |||||| | ||| Sbjct 2641 TCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAAC 2700 Query 95092 GCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAG 95151 ||||| | || || ||||| || ||| || | ||||| | |||||||||||| Sbjct 2701 AGTCTGCTCCTCGCTCCTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAG 2760 Query 95152 TCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCC 95211 | ||||| |||| ||||||||| | ||| | | || || ||||| || || |||| Sbjct 2761 TGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAG 2820 Query 95212 GTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGT 95270 || ||||| || || ||||| || || | ||||| ||||| || | Sbjct 2821 GTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTAT 2879 Query 95271 CAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326 ||||||| | |||| | || || ||| | |||||||| || | || || | Sbjct 2880 GAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTG 2935 Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || |||||||| || ||||||||| | |||||| Sbjct 2936 CCGATGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 2982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494711808998320