Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq701 188 7e-43
>seq701
Length=4748
Score = 188 bits (208), Expect = 7e-43
Identities = 940/1487 (63%), Gaps = 30/1487 (2%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || || ||||| || || || || ||| || | || || || ||| || |
Sbjct 1517 CCCCCACGCTCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTG 1576
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| |||| || ||||| | ||| | |||||| |||||| | ||||
Sbjct 1577 ATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCT 1636
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTA 94073
| || || || || || || | | ||| ||| |||| ||||| | || || ||
Sbjct 1637 CCAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATA 1694
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|||| ||||||||| || || || || || | || |||||||| || |||||||||||
Sbjct 1695 CATCGCCGGTACCAACGGTACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAA 1754
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || || || ||||||||||| | | | ||| |||| || |||| ||
Sbjct 1755 CACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCT 1814
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
|||||| |||||| | || || | |||| | || || || ||||||||||| || ||
Sbjct 1815 CGAGCCTTGGCACTCTGATGTCTTCGATTTCTTGGATCTCCGTAAGAACCACGGTAAGGA 1874
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | || || ||| || || ||| | || || ||||| ||||||||
Sbjct 1875 GGAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACG 1934
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| || || ||| | ||||| || | || ||||| || || || || || ||||
Sbjct 1935 TGTTGAAAAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGA 1994
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | ||| | || || | |||| | ||||| | ||||||||| |
Sbjct 1995 CTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCG 2054
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| || | ||| |||||| ||| | || | || | ||| ||||| ||
Sbjct 2055 CAAGACCATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGG 2114
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| || | ||| | | |||||| | |||| |||| |||||| || |||||||
Sbjct 2115 AAACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGG 2174
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| || ||| ||||||| | | || |||||| |
Sbjct 2175 TACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGT 2234
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
||||| || ||||| | ||| | ||| || | ||| | | | ||||
Sbjct 2235 CGCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GA 2285
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAAC 94731
| |||| | ||| | || || | || | | | ||| || | || |||
Sbjct 2286 TGAAGCTTGCTACGACTTCAAGAAGTTGCATAAGGT--CAGTCAGGTTGTTATTCGCAAC 2343
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791
||||||| | | ||||| |||| |||||| |||| |||||| ||| ||| ||
Sbjct 2344 CTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATG 2403
Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851
|| || ||||| || | || || ||||| | || || || | | |||||
Sbjct 2404 CGCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTGCGT 2463
Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911
|||||| ||| || ||| || | | || | | || || || | ||| |||
Sbjct 2464 ATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTAT 2523
Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
||| ||| | | ||||| || |||| | ||| | || || || |
Sbjct 2524 CACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACC 2580
Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031
||| || || ||| |||| || | ||||| ||| | ||| || ||||||
Sbjct 2581 TTCAAGGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCC 2640
Query 95032 TCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAAC 95091
|| | || | |||||||| |||| || | || || | | |||||| | |||
Sbjct 2641 TCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAAC 2700
Query 95092 GCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAG 95151
||||| | || || ||||| || ||| || | ||||| | ||||||||||||
Sbjct 2701 AGTCTGCTCCTCGCTCCTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAG 2760
Query 95152 TCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCC 95211
| ||||| |||| ||||||||| | ||| | | || || ||||| || || ||||
Sbjct 2761 TGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAG 2820
Query 95212 GTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGT 95270
|| ||||| || || ||||| || || | ||||| ||||| || |
Sbjct 2821 GTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTAT 2879
Query 95271 CAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326
||||||| | |||| | || || ||| | |||||||| || | || || |
Sbjct 2880 GAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTG 2935
Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| ||||||| || |||||||| || ||||||||| | ||||||
Sbjct 2936 CCGATGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 2982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494711808998320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |