Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq133 87.8 2e-12
seq423 86.0 6e-12
>seq133
Length=57550
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || |||||||| | | || || || || || || ||||| ||||| || || |||
Sbjct 39934 ATACCACCGCGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 39993
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| ||| || | || || || || | || | || |||||||| ||
Sbjct 39994 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGG 40053
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || || || || |||| || | || | |||||||||||||||
Sbjct 40054 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTC 40112
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || | ||| || || || || || || || ||||| ||||||
Sbjct 40113 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 40164
>seq423
Length=39909
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| || || || ||||| || || || |||||
Sbjct 20974 ATACCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCA 20915
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || || || | || || || ||| | ||||| ||||||||||| ||
Sbjct 20914 GAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGG 20855
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||||||||||||||
Sbjct 20854 GGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCGATAGTGTCGGAAGACTC 20796
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || | || |||||||| | || || || || || |||||
Sbjct 20795 AACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 20745
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || |||||||| ||||| || || ||| | ||| ||| || | |||
Sbjct 21457 TGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGC 21398
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | ||| || || ||||| ||||| || || || ||||| || ||
Sbjct 21397 TTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTTGGATCTTG 21338
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | ||| ||||| ||||||||||| ||||||| || || || ||
Sbjct 21337 CTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTA 21278
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || ||||||||
Sbjct 21277 AGGGTCTTGACGAAGATTTGCAT 21255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451992792626320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |