Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq413 181 1e-40
seq701 178 2e-39
>seq413
Length=40179
Score = 181 bits (200), Expect = 1e-40
Identities = 538/819 (66%), Gaps = 27/819 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| | || ||||||||||||||||| ||||| || | ||| ||| ||||||||
Sbjct 35165 GTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 35224
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || || ||||| | | || | | | |||| |||| |||
Sbjct 35225 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 35279
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
|||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||||
Sbjct 35280 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 35339
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
||| || || || || || |||| ||| ||||||| || || || | |||
Sbjct 35340 GCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 35399
Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522
| || || | | | | || | | ||| | || | || ||| || |||
Sbjct 35400 TCCTGGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CAG-GCA 35456
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| |||||||||||||| |||||||| || || |||||| |||||| |||
Sbjct 35457 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGC 35516
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | |||||| || | || | |||| ||||||||| |||
Sbjct 35517 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCC 35576
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702
|| ||| || || |||| ||||||| |||||||||| | ||| | | |||
Sbjct 35577 TCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCAT 35636
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGT 127762
|| ||||| | ||||| || ||| || || | ||||| || || | |||||
Sbjct 35637 CGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGA 35696
Query 127763 TCCTTCTTTTCT--GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 127820
| | || || | || || |||||||| | || ||||| || || || |||
Sbjct 35697 T--ATGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGG 35754
Query 127821 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 127879
||| | | | ||| || | ||| | ||||||| | || || ||| |||||
Sbjct 35755 AGTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGG 35813
Query 127880 ACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 127938
||||| | | ||| | | || ||||| || || ||||| || |||| ||
Sbjct 35814 ACCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAA 35872
Query 127939 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 127995
|| || ||||| | | ||| ||| |||| | ||| || | ||||||||
Sbjct 35873 GAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCAGCAGTCAGGCGGTTGTTCCAGTC 35932
Query 127996 GTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|| |||||||| |||||||| | |||||| ||||||||
Sbjct 35933 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCA 35971
>seq701
Length=4748
Score = 178 bits (196), Expect = 2e-39
Identities = 1095/1729 (63%), Gaps = 63/1729 (4%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
|||||||||| || || |||| || || ||||||||||| || |||||||| |
Sbjct 3166 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 3107
Query 115586 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644
| |||||||| | | || | ||||| || | |||| | || || | ||||
Sbjct 3106 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 3048
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
| ||||| ||||| ||||| |||||| || ||||| || ||||| | ||
Sbjct 3047 TGAATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 2988
Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
|| | | ||| ||||| ||||| |||| || ||| | ||| | |||||
Sbjct 2987 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATG 2928
Query 115765 TCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTT 115821
| || || || || || ||| | || ||| || | | ||||||| | |
Sbjct 2927 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCG 2871
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAA 115877
||||| ||||| || | || |||| | | ||| | |||||||| ||
Sbjct 2870 GACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGG----TTGACAACCTGGAA 2815
Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937
|||||| ||||| || | | ||||| |||| ||||| ||||| |||||||| ||
Sbjct 2814 CTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTT 2755
Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997
||| ||||| || |||| || ||| || ||||| || || | ||| || ||||| ||
Sbjct 2754 GTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAGGAGCAGACTGTTACG 2695
Query 115998 GAGACCCACCCCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTC 116055
|| || | | | | | | || || | | |||||||| || | | |
Sbjct 2694 GATGCCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGC 2637
Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115
| | | |||||| ||||||||||||||||| | || || || || |||| || ||
Sbjct 2636 TTGACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTG 2577
Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172
|| || ||||| ||| |||| | ||||| || |||||| ||||||||
Sbjct 2576 GAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAG 2520
Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
|| |||||||| || | || | | |||||| || || || | | |||
Sbjct 2519 ATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG- 2461
Query 116233 CACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291
|| | || || |||| || || || || ||||| || ||||| || || || | |||
Sbjct 2460 CAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCAT 2401
Query 116292 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351
||| || ||||| || || || || ||| |||||| | | | || || ||
Sbjct 2400 GTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 2341
Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411
| ||||||| ||| | ||| | ||| | | | || | || || ||||
Sbjct 2340 GCGAATAACAACCTGACTGACCTTATGCAACTTCTTGAAGTCGTA---GCAAG---CTTC 2287
Query 116412 ATTG-ACATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATC 116465
|| | | | | | | ||||| | || || || || || |||| | ||| ||
Sbjct 2286 ATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTC 2227
Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525
|| |||||| |||||||| || || | || || || ||||| || | |||
Sbjct 2226 AGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTT 2167
Query 116526 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
|||||| || ||| ||| || ||||||||||||||||| |||| | || |||||
Sbjct 2166 CTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTC 2107
Query 116586 CGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTC 116644
|| |||| || ||||| || | ||| | | || | | || | ||| ||| |
Sbjct 2106 AGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATGGTCTTGCGAC 2051
Query 116645 GC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCT 116700
| ||||||| |||||||||| ||| || ||||| ||||| || || ||| ||
Sbjct 2050 CCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC-TCCGTAGCAGTCG 1992
Query 116701 GAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 116760
| ||| || || || | || || | || | ||| | ||| || ||||| ||
Sbjct 1991 GCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGT 1932
Query 116761 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 116820
|||||||| || || |||||||| || || ||| ||||| || || | || ||
Sbjct 1931 TTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCC 1872
Query 116821 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 116880
| || || || ||| | ||||| || || | || ||| | |||||| || || |||
Sbjct 1871 TTACCGTGGTTCTTACGGAGATCCAAGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGG 1812
Query 116881 TACACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGC 116936
|| | || | | ||| | || | | ||| |||||| ||||||| || ||
Sbjct 1811 TAGATGGCAAAAGCACCGGGTCGCTTGTTG-CCACCCTGGTCGACATACCGAGCAGTGTT 1753
Query 116937 GTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATA 116994
||| || || |||||||| |||| ||||||| ||| || || || || ||| ||
Sbjct 1752 GTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTA 1693
Query 116995 CGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 117054
||| | | || | | | ||| | | | ||||||||| || ||| ||| |||
Sbjct 1692 TGAGCC--AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAG 1635
Query 117055 ATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCG 117114
|| || || | ||||| | ||||||| || || || ||| |||| | |
Sbjct 1634 ATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCA 1575
Query 117115 ATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 117174
| | |||||| || | ||| ||| || || || || |||||||| || || |
Sbjct 1574 ACCAAGAAGCAAGATGATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAA 1515
Query 117175 GCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 117221
|| || ||| | | |||| |||||| || ||| |||||||||||
Sbjct 1514 GCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 1468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613493073996720
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