Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq285 284 2e-71
seq701 120 4e-22
seq172 93.3 5e-14
>seq285
Length=40966
Score = 284 bits (314), Expect = 2e-71
Identities = 982/1529 (64%), Gaps = 27/1529 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || ||||| | | ||| || || || || || ||
Sbjct 19406 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 19465
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| ||||| ||||| |||||| | ||| || || | | |||| || |
Sbjct 19466 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 19525
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||||| |||||| | || | ||| || || |
Sbjct 19526 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACA 19585
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || | | | |||| ||| |
Sbjct 19586 CCACGAGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGATTGTTGTCCTTA 19645
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| | ||| ||||| || ||||| | || || |||| || || ||
Sbjct 19646 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 19705
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | || || || || || | || |||| | ||||
Sbjct 19706 GTGGAGAAGACCTCAGACTTCTTTGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 19765
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| || |||| || ||||| || || | || || |||| | ||||
Sbjct 19766 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGGGGGGCGACATC-AAGA--AGCAGG 19822
Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036
||| | || || |||| |||| | | || ||||| |||||
Sbjct 19823 ATCTCG------TTGGTGGCCTTGCTGGAGGTATCACCGGAGAGAATCGCGGCCTGGACG 19876
Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096
| || ||||| || || |||||||| ||||| || | || || | || || |||||
Sbjct 19877 GCGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 19936
Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156
|| || || | | | | || | || || || || || |||||||| | ||
Sbjct 19937 AAGTAGTCGGTAATGAGCTTCTGGACACGGGGAATACGGGTAGAGCCACCGACGAGGACA 19996
Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216
|| || | || || || |||||||| | ||| || ||||| || |
Sbjct 19997 ATCTCGTGGACAAGAGACTTGTCGATCTTGGCGTCGGTGAGGACACGGTCGACGGGCTGG 20056
Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276
|| ||||| | ||| || || ||||| ||||| |||||||| || || ||
Sbjct 20057 ATGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATAGAGGTG 20116
Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336
||||| |||| || ||| | | || || || || || | || || || | || ||
Sbjct 20117 TAGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCGATAGAGGTCTGAGCAGAAGAGGAA 20176
Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396
| |||||||| || || ||||| || ||||| | ||| || || || || ||| |
Sbjct 20177 AGTGTTCGCTTGGCACGTTCACAAGCAGTTCGGAGACGTCGCAGAGCGCGGACGTTGGTG 20236
Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456
|| || ||||| ||| | ||| || || | |||||| | || |
Sbjct 20237 CTAAGGTCCTTCTTGAATTTCCTTTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTG 20296
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 20297 TCAAAGTCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 20356
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || ||||| || || |||||||| || || || || || |||
Sbjct 20357 TCCTCAATGGTAAGGAGAGACACATCGAAAGTGCCACCACCAAGATCGAAGATCAGGACG 20416
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| || |||||||| || || || || || || |||||
Sbjct 20417 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGTTCG 20476
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || ||| ||| || || || || | ||||| || || ||||| ||
Sbjct 20477 TTGATGATTCGGAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 20536
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| |||||||| |||||||| ||||| || || || |||| |||| ||| || ||
Sbjct 20537 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCAAGG 20596
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | || ||| |||||||| | ||| | || ||||| || | |
Sbjct 20597 TAAGACTCAGCGGTCTCGCGCATCTTGGTAAGGATCATAGCAGAGATCTCCTCGGGGGTG 20656
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
|| || || || || || || || || || || |||| ||| || | | |
Sbjct 20657 AAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 20713
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
| | ||| | | ||| ||||||||| | || |||| ||| | ||||| |
Sbjct 20714 ACGATCTTGAAGGGGAAATGCTTCATATCGGCCTGAACCTCAGCGTCGGCGAACTTGCGA 20773
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| | ||||| || || || || ||||| | |||||||| || |||||||||
Sbjct 20774 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATAGCGACTTGGTTCTTG 20833
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || || || ||||| || | || || || ||||| | || ||||| |||
Sbjct 20834 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 20890
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|| || || |||||||| || || || ||
Sbjct 20891 CGGTTACCCTGGTCGTTGGCGATGATATC 20919
>seq701
Length=4748
Score = 120 bits (132), Expect = 4e-22
Identities = 528/824 (64%), Gaps = 39/824 (5%)
Strand=Plus/Minus
Query 105319 ATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATAT 105378
|| ||||| | || || ||||| ||| || || || || ||||| ||||| ||
Sbjct 2180 ATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAT 2121
Query 105379 GGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC-----TG 105433
||| |||| || ||| | |||| | || ||| || | ||||| || | ||| ||
Sbjct 2120 GGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATG 2061
Query 105434 GTACAACTTTAG----TTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489
|| ||| | |||| | ||||| ||||| || ||||| ||| | || |||
Sbjct 2060 GT----CTTGCGACCCTTGCCCT-CCTTC----TCGTACTTTTCGTACAGAGCCTCGAAC 2010
Query 105490 TCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTA 105549
|| | ||||| ||| | || || || | || || | || || ||| | |
Sbjct 2009 TCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCA 1950
Query 105550 CCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGC--TGAAAAGAGGT 105607
|| | |||||| ||||||||||| | ||| || ||||| | ||| ||||||| |
Sbjct 1949 CCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGA--T 1892
Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667
| || | |||| || | ||| || ||| ||| | || | ||||||| | ||
Sbjct 1891 CACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAAGAAATCGAAGACAT 1832
Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCT 105720
| | |||||| || || | |||| |||| || ||| ||| | ||| | |
Sbjct 1831 CAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT---GTTGCCAC-CC 1776
Query 105721 TGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGAT 105780
|| | |||||| | || || ||| | || || | ||| |||| |||||||| |||
Sbjct 1775 TGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGAT 1716
Query 105781 GTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCA 105840
|| || || || || || | ||| | | ||||| | | ||| || | || |||
Sbjct 1715 GTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCA 1656
Query 105841 ATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCG 105900
||||| |||||| ||| ||| ||||| || | |||||||| || || ||
Sbjct 1655 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCA 1596
Query 105901 ATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACC 105959
||||| || ||||| | ||| || ||| || ||||| | ||| || ||| || || ||
Sbjct 1595 ATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTG-GGGCTGAGGAGTGCC 1537
Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTAT 106017
|||||||| || || || | ||||| |||| || ||| | || | | | ||||
Sbjct 1536 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAA--CTTGCTAGACATCAGATTGTAT 1479
Query 106018 GTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGA 106077
|| |||| ||| | || ||||| | || ||||||| || || ||||| |
Sbjct 1478 GTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATG 1419
Query 106078 TATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATA 106121
| || || || | ||| | |||||||||||| |||| ||
Sbjct 1418 TGCTGAGGGCGCTCGACAATCTTACCGTCAATTTTGAGGAGGTA 1375
>seq172
Length=68174
Score = 93.3 bits (102), Expect = 5e-14
Identities = 169/244 (69%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | || || || || ||||| || ||| || ||||||||
Sbjct 55368 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATACC 55309
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||||| | | || ||||| || ||||||||||| || || | || |
Sbjct 55308 GTCATCAATGGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTA---GACGAT 55252
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| || | ||| || | | | |||| || |||||||| |||||||| || || || || |
Sbjct 55251 GATC-TGTCGCTCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCT 55193
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || | || || ||| ||| || || ||||| | | ||||| || || || ||||
Sbjct 55192 CGTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTC 55133
Query 7695 GTTG 7698
| ||
Sbjct 55132 GCTG 55129
Score = 86.0 bits (94), Expect = 8e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || |
Sbjct 55070 CGTTGAAGTAGGCAGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 55011
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| |
Sbjct 55010 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 54951
Query 7824 TC 7825
||
Sbjct 54950 TC 54949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635118176067280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |