Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq413 152 6e-32 seq946 113 6e-20 >seq413 Length=40179 Score = 152 bits (168), Expect = 6e-32 Identities = 181/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | ||||| | || |||| || || | |||||| || || ||||| || Sbjct 35695 CTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGA 35636 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | | || | | | | ||||||| |||| ||| | || ||||| |||||| Sbjct 35635 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGA 35577 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||| ||| ||||| | |||| | |||||||||||||| |||||||| Sbjct 35576 GGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 35517 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| ||||| ||||||||||||||| ||||||||||||||||| || ||| || || Sbjct 35516 GCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTT 35457 Query 102329 TGC 102331 ||| Sbjct 35456 TGC 35454 >seq946 Length=23682 Score = 113 bits (124), Expect = 6e-20 Identities = 229/332 (69%), Gaps = 10/332 (3%) Strand=Plus/Plus Query 16058 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 16113 ||| | |||||||| ||| || ||||| || ||| || || ||| |||| || || | Sbjct 13768 TCCAATGGCATCAAGCTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 13825 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | ||||| || || || |||||||| || ||||||||||| ||||| |||| | | Sbjct 13826 GTG--AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 13882 Query 16174 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 13883 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 13942 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 16292 |||||||| ||||| || ||| | |||||| |||| || | || || ||| Sbjct 13943 GTCTTACCAGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 14002 Query 16293 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 16352 | | | | || || | ||| ||||| || |||| |||| | || |||||||| Sbjct 14003 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 14062 Query 16353 GCGTCAATCCCCTCAACATCGGTAAACCGAGT 16384 ||||| || | ||||||| | |||||||| Sbjct 14063 TCGTCACAACCATGAACATCGTTGAACCGAGT 14094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728107406240