Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq701 255 7e-63
seq106 104 3e-17
seq214 89.7 6e-13
>seq701
Length=4748
Score = 255 bits (282), Expect = 7e-63
Identities = 1087/1693 (64%), Gaps = 61/1693 (4%)
Strand=Plus/Minus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466
||||| || ||||| || || ||||| ||| |||||| || | || | ||||| |
Sbjct 3134 CGAAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 3076
Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526
|| ||| | || || || ||| | ||||| ||||| |||||||| |||||
Sbjct 3075 GATCTTGCCCATCGTGGGGTCCTTCATGTGAATGTTCAGTGACTGGGACTGATCAATGAA 3016
Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582
||| |||||||| ||||| | | || | | ||| | | ||||||||||
Sbjct 3015 GGCACCTCGATCAGCAGCCATCTGAACGA----CCTGGCGCTGAGAGATCTCCCAGACAG 2960
Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639
||||||||| | ||||| ||| | || |||| ||||| ||||| || |||
Sbjct 2959 TCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 2900
Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699
|||| | | || | | |||||| | | ||||| ||||| | | | || | ||
Sbjct 2899 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 2846
Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756
| || || | ||||| || || |||||||| || || || ||||||
Sbjct 2845 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGA 2786
Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816
| || | |||||||| ||||| ||||| |||||||| | || || | || || |
Sbjct 2785 TATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAG 2726
Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876
| ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || |
Sbjct 2725 TAGGCATAGGAGCGAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 2666
Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936
| ||||| || | | || | || | | |||||| || || |
Sbjct 2665 GAGTCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCAAACTGGA 2612
Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996
| | |||||||| || || ||||||||||| | ||| | ||||| ||| ||||
Sbjct 2611 GGATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 2552
Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055
|| | | | || | | || || || ||||| || |||||||| || || || ||
Sbjct 2551 GCT-GCACGGAGGCAGTGAGGGCAGCGTGATAGATGGTCTCAAAGATCTGC---TTGTTG 2496
Query 110056 AGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAG 110111
|| |||| ||| | |||||||| | || || || || || |||| || ||
Sbjct 2495 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCAAGGAAAGCATCAGCAAG 2437
Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171
||||||||||| ||||||||||| || || ||||||| | ||||| | ||
Sbjct 2436 GCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGAC 2377
Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231
||||| ||| ||||||| | || || || | ||| || ||| |
Sbjct 2376 AGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTT 2317
Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAA 110290
||| | || | | | ||| | | | || | || |||| | ||| |||| |
Sbjct 2316 ATGCAACTTCTTGAAGTCGTA-GCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGAGACA 2258
Query 110291 TAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTAC 110350
||| ||||| ||||| |||| |||||| | | ||| || | |||||| || |
Sbjct 2257 GAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGC 2198
Query 110351 ACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCAT 110410
| | |||||| || ||| ||| | |||||| || || ||| |||||| ||||
Sbjct 2197 AAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCAT 2138
Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470
|||| ||||||||| ||||| | || || || ||||| | || |||||||| | ||| |
Sbjct 2137 CCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA 2078
Query 110471 -CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527
| || | | | | | || |||| | | || |||| ||||||||| |||||
Sbjct 2077 GCTTCTGAGCCTTG-ATGGTCTTGCG--ACCCTTGCCCTCCTTCTCGTACTTTTCGTACA 2021
Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587
|||| || |||| |||||| || | || || || || ||| || | |
Sbjct 2020 GAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCA 1961
Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647
| | ||| | || || ||||| | |||||||| || ||||| ||||| | ||
Sbjct 1960 GTGTCCAGTCACCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAA 1901
Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707
|||||| |||||| ||| |||| || | ||| ||||| || || ||||| || |
Sbjct 1900 GGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAAGAAAT 1841
Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT------GGATCCCTTACGAC 110761
| | || ||| |||||||| || ||||| |||| || | || || ||| |
Sbjct 1840 CGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGC 1781
Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821
|||| |||| ||||| || || ||| |||||||| | |||||||||| ||| |
Sbjct 1780 CACCC---TGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATAC 1724
Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881
||| ||| ||| || ||||| || || | | |||||||| ||| | ||
Sbjct 1723 CATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACAT 1664
Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAA 110940
| |||||||||||| ||| ||| || ||||| ||| |||| ||| | ||
Sbjct 1663 TTAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAG 1605
Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000
|| || ||||| || |||| | ||| | |||||||| || | || || ||
Sbjct 1604 ATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGCTGA 1545
Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCT 111058
|| || || ||||||||||| || || | ||||| ||| ||| |||| ||||||
Sbjct 1544 GGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTAGACATCA 1487
Query 111059 TGTTGTATGTGTC 111071
|||||||| ||
Sbjct 1486 GATTGTATGTCTC 1474
>seq106
Length=88366
Score = 104 bits (114), Expect = 3e-17
Identities = 278/416 (67%), Gaps = 18/416 (4%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| || || || ||||| || | | || | || || ||||| | || || || ||
Sbjct 41903 CGGTCAAATCGCCCTGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGATTGGTGCCG 41962
Query 11563 GCAATGACTACAATGCCAG-TCTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|||| || |||| || | || | | | | ||||||||||||||| ||||||| |||||
Sbjct 41963 GCAAGAACAACAA--CCTGCTCACGAGTATTGAAACCGTCCATTTCAGTGAGAATCTGGT 42020
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTCTTACCG 11679
| | || ||| |||||||||||| | | || || | |||| | | | | |
Sbjct 42021 TCAGAGTTGCTTCCCGCTCATCGTTGCCACCGAATCCC--CGGCCGCTCTCCTGTCGCGC 42078
Query 11680 ACA-------GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
|| ||||||||||| || ||||| | ||| || || ||| |||| | |
Sbjct 42079 ACGTCCAATTGCGTCAATCTCGTCAATGAAGATGATGCAAGGGGCGTTCTTACGTCCTTC 42138
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG- 11791
|||| | || | |||||| | ||| ||||| || ||||| |||||||| | |
Sbjct 42139 GGCGAACAAATCTCTCACACGCGAAGGTCCGACACCGACAAACATTTCAACGAACTCAGA 42198
Query 11792 -CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850
| || | ||||||| ||| || || |||||| || || |||| || || |
Sbjct 42199 ACCGCTCA-CACTGAA-GAATGGTACTCCAGACTCGCCGGCTGTGGCCTTGGCAAGCAAT 42256
Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
|||||||| |||||||| | ||||| | || || || || ||||||||||||||
Sbjct 42257 GTCTTACCAGTACCAGGAGGGCCAGCTAAAATAGCACCTCGAGGGATCTTGGCACC 42312
>seq214
Length=102255
Score = 89.7 bits (98), Expect = 6e-13
Identities = 123/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 158480 ATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGTTGGTGCGG 158539
|||| || | || ||||| || ||| ||||| ||||| | || || || || |
Sbjct 71403 ATGGACGCATTGCCCCTCGATCAGGTCTGGCTTCTAAGCATTTCATTGACACAGGCGCTG 71344
Query 158540 GGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACA 158599
| ||||||||| | ||||| ||| ||||||| ||| | |||||||| ||| ||
Sbjct 71343 GTGTCATCGATGCCGATTACCGTGGTCAAGTCAAGGTCCTGCTCTTCAACCATAACGAAT 71284
Query 158600 AGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAACG 158651
||||||||||| ||| | || || ||||| || || ||||||||||| ||
Sbjct 71283 CCGACTTTGAGGTGAAGGAAGGCGACCGCATTGCTCAACTTGTTCTAGAGCG 71232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588962438827600
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