Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq856 118 1e-21 >seq856 Length=56040 Score = 118 bits (130), Expect = 1e-21 Identities = 322/485 (66%), Gaps = 15/485 (3%) Strand=Plus/Plus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | |||||||||| || || || | || ||| | || |||| Sbjct 31431 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 31488 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || ||| | || || | || || || || Sbjct 31489 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGTCTTATCCCTGTTTCTGCTCACGGT 31547 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| ||||| ||| |||||||| | Sbjct 31548 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTGAAGTGTGACGGC 31607 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534 | || ||| ||| | || ||| | ||||| || ||| || || | | | | Sbjct 31608 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 31664 Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594 || || | ||| ||| |||| ||||| ||||| ||||| || || | | || Sbjct 31665 GAGCTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATT 31724 Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 | || | ||| | |||| || ||| |||| || | || || | || ||||| || Sbjct 31725 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGCCTTGTCTACATGGACGGTGCCAAC 31784 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | || || ||| | ||||| | || ||||| |||||| ||||| |||||||| Sbjct 31785 ATGAACGCTCAGATTGGTCTCTGCAGCCCTGGTGACATTGGTGCTGATGTCTGTCATCTC 31844 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 ||| | || ||||| ||||||||||| || || ||||| ||||| || || || || || Sbjct 31845 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGTGGTCCCGGTGTTGGCCCCATC 31904 Query 159775 GGTGT 159779 | ||| Sbjct 31905 GCTGT 31909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588037660121120