Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq856 118 1e-21
>seq856
Length=56040
Score = 118 bits (130), Expect = 1e-21
Identities = 322/485 (66%), Gaps = 15/485 (3%)
Strand=Plus/Plus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361
|| || ||| | || | |||||||||| || || || | || ||| | || ||||
Sbjct 31431 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 31488
Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420
| | ||| || || | ||||| |||| || ||| | || || | || || || ||
Sbjct 31489 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGTCTTATCCCTGTTTCTGCTCACGGT 31547
Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478
|| || ||||| || || | ||||| || ||||| ||||| ||| |||||||| |
Sbjct 31548 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTGAAGTGTGACGGC 31607
Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534
| || ||| ||| | || ||| | ||||| || ||| || || | | | |
Sbjct 31608 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 31664
Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594
|| || | ||| ||| |||| ||||| ||||| ||||| || || | | ||
Sbjct 31665 GAGCTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATT 31724
Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654
| || | ||| | |||| || ||| |||| || | || || | || ||||| ||
Sbjct 31725 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGCCTTGTCTACATGGACGGTGCCAAC 31784
Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714
| || || ||| | ||||| | || ||||| |||||| ||||| ||||||||
Sbjct 31785 ATGAACGCTCAGATTGGTCTCTGCAGCCCTGGTGACATTGGTGCTGATGTCTGTCATCTC 31844
Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774
||| | || ||||| ||||||||||| || || ||||| ||||| || || || || ||
Sbjct 31845 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGTGGTCCCGGTGTTGGCCCCATC 31904
Query 159775 GGTGT 159779
| |||
Sbjct 31905 GCTGT 31909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588037660121120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |