Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq856 111 2e-19 >seq856 Length=56040 Score = 111 bits (122), Expect = 2e-19 Identities = 271/407 (67%), Gaps = 9/407 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | || || || || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 31909 ACAGCGATGGGGCCAACACCGGGACCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 31850 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || |||||||| ||||| |||||| ||||| || | ||||| | ||| || Sbjct 31849 AGGTTGAGATGACAGACATCAGCACCAATGTCACCAGGGCTGCAGAGACCAATCTGAGCG 31790 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || | || |||| || || || | | ||| | Sbjct 31789 TTCATGTTGGCACCGTCCATGTAGACAAGGCCGCCATGCTCGTGGACAAGATCACAGACT 31730 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || | || | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 31729 TGCTTAATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 31670 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 31669 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 31613 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||| ||| ||||| ||||| || |||||| | ||| |||||| Sbjct 31612 GTCTTGCCGTCACACTTCACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 31553 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 || || || || || || | || || ||||| || |||| ||||| Sbjct 31552 TTGGTACCGTGAGCAGAAACAGGGATAAGACAGACCTTTCGCTTATC 31506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578985068561840