Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq856 111 2e-19
>seq856
Length=56040
Score = 111 bits (122), Expect = 2e-19
Identities = 271/407 (67%), Gaps = 9/407 (2%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| | || || || || || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct 31909 ACAGCGATGGGGCCAACACCGGGACCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 31850
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || |||||||| ||||| |||||| ||||| || | ||||| | ||| ||
Sbjct 31849 AGGTTGAGATGACAGACATCAGCACCAATGTCACCAGGGCTGCAGAGACCAATCTGAGCG 31790
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || ||||| || | || || | || |||| || || || | | ||| |
Sbjct 31789 TTCATGTTGGCACCGTCCATGTAGACAAGGCCGCCATGCTCGTGGACAAGATCACAGACT 31730
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
|| | || | | || || ||||| ||| || ||||| |||| ||| ||| |
Sbjct 31729 TGCTTAATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 31670
Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479
|| ||| | | | || || ||| || ||||| | ||| || | ||| |||
Sbjct 31669 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 31613
Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536
|| | | |||||||| ||| ||||| ||||| || |||||| | ||| ||||||
Sbjct 31612 GTCTTGCCGTCACACTTCACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 31553
Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583
|| || || || || || | || || ||||| || |||| |||||
Sbjct 31552 TTGGTACCGTGAGCAGAAACAGGGATAAGACAGACCTTTCGCTTATC 31506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578985068561840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |