Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq701 214 2e-50 seq413 131 2e-25 seq214 91.5 2e-13 >seq701 Length=4748 Score = 214 bits (236), Expect = 2e-50 Identities = 1141/1782 (64%), Gaps = 53/1782 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 1410 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1469 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| | |||||| |||| | | ||| || || | || || ||| Sbjct 1470 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 1527 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||| || || || || || | || ||||||| | | | | ||||| Sbjct 1528 TTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTGATATGAAGGAC 1587 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 1588 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1647 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || |||||||| | | | || | | | || | | ||| || ||| || | Sbjct 1648 GGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 1705 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| |||||||| |||| |||||||| || || ||| ||| || || | Sbjct 1706 CCAACGGTACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 1765 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622 |||| | || | | ||| | || | ||| | | || ||||| | || || ||| Sbjct 1766 ATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 1824 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | || ||| | || | || ||||| ||| | || |||| || | Sbjct 1825 CACTCTGATGTCTTCGATTTCTTGGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TCCG 1883 Query 75683 TGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 || | ||||| ||| | | |||| ||||| || || ||||||||||| || ||||| Sbjct 1884 TGCCCGTGATCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACGTGTTGAAA 1942 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || ||| | ||| | || | || || || || || || ||| ||||| | Sbjct 1943 AGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACG 2002 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGA 75857 | |||||||| || || || ||| |||||| || ||||||| | | ||| || Sbjct 2003 GAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAA---GA 2059 Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | | || | | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 2060 CCAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAAC 2118 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 |||| ||||| ||||||||||| || ||| ||||| ||||||||||| | || || Sbjct 2119 CCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACC 2178 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| || |||||||| |||||| | |||||| | || ||| ||| Sbjct 2179 ATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCT 2238 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GA--CTCGCACT 76093 || ||||| | || || | | || || | |||| | || || || || Sbjct 2239 GTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGC--- 2295 Query 76094 TTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 | || | | || || || ||| | ||| || |||||| || || ||| | Sbjct 2296 TACGACT-TCAAGAAGTTGCATAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGAT 2354 Query 76153 CATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 ||| || || || || || || || || || ||| ||||| ||| |||| Sbjct 2355 CATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACC 2414 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCATTTG 76271 |||||| | |||||||| || || || |||| || || | ||| | | | || | Sbjct 2415 CATTGGTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTGCGTATGCCC-TTCG 2473 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | ||| || || ||| | || | |||||||| ||||| |||||||| ||| Sbjct 2474 AGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTATCACGCTGCCC 2533 Query 76332 TGGAGGCGAGTTGTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390 | || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 2534 TCACTGCCTCC-GTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 2592 Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTAC 76450 ||||| || | || | || |||||||| |||||| || || || || || | || Sbjct 2593 CCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGG-AACGTCAAGCCCT-CTGACCTCT 2650 Query 76451 G--ACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | ||||||| | ||| ||||| ||||| | || | ||||||||||| Sbjct 2651 GGGACTGGGAGACTCTTCGAGAGGAAG---TCAAGACACACGGCATCCGTAACAGTCTGC 2707 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || ||||| || ||| ||| | || || ||||| || || || ||||| | Sbjct 2708 TCCTCGCTCCTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAGTGCTTCG 2767 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | || ||||| | || ||||||| | | ||||| |||||||| |||||| Sbjct 2768 AGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCA 2827 Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || || |||| ||||| | || ||||| |||||| | | ||||||| | | Sbjct 2828 ACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACC 2887 Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745 ||| | | | |||||||||||| || || | | ||||| | ||| ||||| Sbjct 2888 GCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGG 2947 Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATC 76805 ||| ||| || || ||||| ||| | | ||| || | ||||| || |||| Sbjct 2948 CTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATC 3007 Query 76806 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGAT 76863 | ||| ||||||||||| |||| ||| |||| | |||| | || ||||| Sbjct 3008 GAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATTCACATGAAGGACCCCACGAT 3065 Query 76864 GTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGT 76922 | |||| || | |||||| | || | || ||||| | || ||||| ||||| |||| Sbjct 3066 GGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACCGGCATGT 3124 Query 76923 ACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 |||| || || || |||| || || |||||||||| Sbjct 3125 ACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 3166 >seq413 Length=40179 Score = 131 bits (144), Expect = 2e-25 Identities = 334/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 35659 AAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 35601 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| ||||| ||| ||||||||||||||| || | ||| | |||| | Sbjct 35600 TCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTT 35541 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| || || |||||| || || || || || || Sbjct 35540 CTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCG 35481 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 || |||||||| ||| || |||||| || ||| || | || | || | | Sbjct 35480 TGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 35424 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| || | | ||||| | ||| | | || || || |||||| | | ||| Sbjct 35423 TGCCAGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTT 35364 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | || || || || || ||| ||| |||| ||||||||||| ||| |||| Sbjct 35363 CCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTA 35304 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGG 65433 |||||||| || | ||||||||||| |||| || | | | | Sbjct 35303 CATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CAACGAGAAGGTCTAC 35249 Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 || || | || || || ||||| ||||| ||||| ||||| || |||||||||||| Sbjct 35248 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTC 35189 Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||| |||| ||||| Sbjct 35188 TTCGAGAAGCGTGTTGCTGACTA 35166 >seq214 Length=102255 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || |||| ||| ||||||||||| || Sbjct 71231 GCGCTCTAGAACAAGTTGAGCAATGCGGTCGCCTTCCTTCACCTCAAAGTCGGATTCGTT 71290 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||||| ||| || |||| ||| || ||||| || || Sbjct 71291 ATGGTTGAAGAGCAGGACCTTGACTTGACCACGGTAATCGGCATCGATGACACCAGCGCC 71350 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||| ||||| ||||| || |||| || |||| Sbjct 71351 TGTGTCAATGAAATGCTTAGAAGCCAGACCTGATCGAGGGGCAATGCGTCCAT 71403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555863984960