Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq423 102 6e-17 >seq423 Length=39909 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || ||||| || || ||||| || || | || || || Sbjct 21470 ACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCC 21411 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| |||||||| | || | || || |||||||| ||||||||||| || Sbjct 21410 ATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTT 21351 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || || ||| | || | || || || || ||||| ||||| || Sbjct 21350 GTCTTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAAT 21291 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | ||| || || || || ||||| Sbjct 21290 GGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 21255 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | |||||| || ||||| ||||||||||| || || |||| ||| || Sbjct 21241 CGGAGGACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCG 21182 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| || |||||| | |||| | ||||| || || || || ||||| ||| Sbjct 21181 TCTTCAAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTG 21122 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | || ||| | || | || || || || || ||||| || || Sbjct 21121 TCCTG-AATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAACCTCAAGGGTGAT 21063 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATAT 29780 || |||||||| | ||| || || | ||| Sbjct 21062 GGTCTTGCCAGTGAGGGTCTTGACGACTAT 21033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385210552069722