Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq423 147 4e-30
>seq423
Length=39909
Score = 147 bits (162), Expect = 4e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| ||||| ||||| ||||||||||| ||||| || || || || |
Sbjct 21483 TACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGG 21424
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| ||| || || || ||||| || ||||| ||||| |||| |||||||| || |
Sbjct 21423 AAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGG 21364
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||| ||||| ||| ||||| || ||||| ||||| ||||| | ||
Sbjct 21363 GAATACCCTCCTTGTCTTGGATC-TTGCTCTTCACATTATCAATGGTATCGGATGACTCG 21305
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||| ||| || ||||| || || | ||||| || || || |||||
Sbjct 21304 ACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 21255
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||||||||| || || || || || || | || ||| |||||||| |||||
Sbjct 21229 TGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCAAGTTGC 21170
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|||||||||||||| || | || || || ||||| || || ||||| || ||||||||
Sbjct 21169 TTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTC 21110
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
| || ||||| || || ||||| | || || || | || || |||||||| ||
Sbjct 21109 GACTTAACATTGTCGATGGTATCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCAGTG 21050
Query 82788 AACGTCTTTACAAATAT 82804
| ||||| || | |||
Sbjct 21049 AGGGTCTTGACGACTAT 21033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981804028264438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |