Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq701 118 3e-21 >seq701 Length=4748 Score = 118 bits (130), Expect = 3e-21 Identities = 359/548 (66%), Gaps = 9/548 (2%) Strand=Plus/Plus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||||| | |||||||| | | | || || || || |||||| || || || ||| Sbjct 1552 CAATTATCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGGAATCTACGAT 1611 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 |||| || ||| | || || || | |||| || |||||| | | || || Sbjct 1612 ACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC 1671 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 |||||| | | || || | ||||| | || ||| | || | ||| ||||| Sbjct 1672 CGTATTCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCGAATGGTATTGTT 1731 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GA 110747 || ||| | | ||||||||| ||||||| ||||| | || ||||| || | || Sbjct 1732 CCTATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGA 1791 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | ||||| ||||| ||||| |||||||| || ||| | || || ||||| || Sbjct 1792 CCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGATGTCTTCGATTTCTTGGAT 1851 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 || ||||| || || || || || | || |||||| | || ||| | ||| Sbjct 1852 CTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGG 1911 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 || | ||| | ||||||||||||||| || | || || ||| | || ||||| || Sbjct 1912 ATCCCTGATCTTTTCATGAAACGTGTTGAAAAGAACGGTGACTGGACACTGATGTG-CCC 1970 Query 110928 CATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAA 110986 || || | ||||| || | || || ||| | ||||| || | || |||||||| Sbjct 1971 CAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAA 2030 Query 110987 ATATGAAAAAGAAGGCAAGTTTCGCAA-ACAAATTCCA-GCTCAAGAACTTTGGTTCAAA 111044 || || || || |||||| |||||| || | || | ||||| | ||||||| | Sbjct 2031 GTACGAGAAGGAGGGCAAGGGTCGCAAGACCA--TCAAGGCTCAGAAGCTTTGGTACGCC 2088 Query 111045 ATCCTTGA 111052 || ||||| Sbjct 2089 ATTCTTGA 2096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186784790476162