Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq423 105 2e-17
>seq423
Length=39909
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||| | || || ||| |||||| ||||
Sbjct 21498 AAGACCCTTACTGGAAAGACCATCACCCTTGAGGTCGAATCCAGTGACACTATCGACAAC 21557
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || || || || || || || | |||||||||
Sbjct 21558 GTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAGCAGCGTCTTATCTTC 21617
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||||||||| | || ||| ||| |||||| ||||||| |||||
Sbjct 21618 GCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAGTCA 21677
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||||||||| ||| | |||||||
Sbjct 21678 ACTCTTCACCTCGTTCTCCGACTTCG 21703
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| | ||| ||||||||||| ||||| ||||||| || ||||| ||| ||
Sbjct 21703 CGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG 21644
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||||||| |||||| || ||||||||||| || || |||
Sbjct 21643 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGA 21599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181792908290482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |