Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq423 84.2 2e-11
seq133 84.2 2e-11
>seq423
Length=39909
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987
||||||| || || |||||||||||||||| ||| || |||||| | ||| ||||| |
Sbjct 21678 TTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCAG 21619
Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
|||| |||||||| ||||| || || || || || || || ||| || ||||
Sbjct 21618 CGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCA 21559
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| || | ||| || | | || || || | || | || || ||||| || || |
Sbjct 21558 CGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTTTCCAGTAAGGGTCT 21499
Query 132108 TTATGAAAATCTGCAT 132123
| | ||| ||||||||
Sbjct 21498 TCACGAAGATCTGCAT 21483
>seq133
Length=57550
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||||||| ||| || ||| |||||||| || || | |
Sbjct 39970 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 40029
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || ||||| || || || || ||||| || || || || || || |
Sbjct 40030 AAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 40089
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || |||| | |||||| || | || | ||| || || || || || ||
Sbjct 40090 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 40149
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 40150 ACGAAAATCTGCAT 40163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476600226027120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |