Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq423 114 1e-20
>seq423
Length=39909
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||||||| | |||| | ||||| | ||| |||||
Sbjct 21679 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCA 21620
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || |||||||| ||||| || || | |||||| || || |||||| | |||
Sbjct 21619 GCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTC 21560
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | |||||| ||| ||| || || || || || | || || || || ||
Sbjct 21559 ACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTTTCCAGTAAGGGTC 21500
Query 27231 TTCACAAAGATTTGCATA 27248
||||| ||||| ||||||
Sbjct 21499 TTCACGAAGATCTGCATA 21482
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || || || || ||||||||| | | || | || ||
Sbjct 21463 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 21404
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| || || || ||| | ||||| |||||||||||||| || | |||||| || || |
Sbjct 21403 AGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTTGG 21344
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| | |||| | || | || || | | || ||||| ||||| || | ||
Sbjct 21343 ATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTT 21284
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || || || ||||||||||||
Sbjct 21283 CCAGTAAGGGTCTTGACGAAGATTTGCATA 21254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424924860488304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |