Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq413 113 1e-19 >seq413 Length=40179 Score = 113 bits (124), Expect = 1e-19 Identities = 350/531 (66%), Gaps = 17/531 (3%) Strand=Plus/Minus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 ||||||||||||||||||||||| | ||| |||||| | || || || |||| Sbjct 35962 GAGGAGATTGATCTCTCCAAGGATCTTCACGACTGGAACAACCGCCTGACTGCTGATGAG 35903 Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465 | | |||||| | |||| | || ||||| || | || ||||||||| Sbjct 35902 C---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAAC 35846 Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525 ||||| || || ||| ||| | ||| | | ||||||| || | ||||||| Sbjct 35845 GAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTAC 35786 Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585 | ||||| | ||||||||||||||| ||||| |||| | | ||| | || Sbjct 35785 GGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACAC- 35727 Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGTTCAT---GACCACGCC 443641 ||| || || || || ||||| | |||| ||| || ||| ||||| || Sbjct 35726 CTACATC--AAGGAGCCCGCCCAGCGAACATATCTCTTCAACGC-CATTGAGACCATTCC 35670 Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTCAGC-T 443700 ||||| | ||| || |||||| | | ||| || | || || ||| | | Sbjct 35669 CTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAG-GATAAGGACTCCTCCT 35611 Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760 | | | |||| || || || ||||||| || || || | || || || ||| || || Sbjct 35610 TTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGC-GCCTTC 35552 Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820 ||||| ||||||||| | || |||||||| || |||| ||||||||||| ||||| Sbjct 35551 GCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAG 35492 Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 || ||| ||| ||||||||| | || ||||| ||||| || ||| || Sbjct 35491 CTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 35441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588298514277690