Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq423 114 1e-20
>seq423
Length=39909
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||||||||| | || || || || || || | ||
Sbjct 20744 CATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 20803
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | ||||| || ||||| ||||| || ||||| || ||||| ||
Sbjct 20804 CGACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 20863
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| || || || | ||||||||| || | || ||| | || | || ||||||||
Sbjct 20864 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 20923
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | ||| | ||| | || | || ||||| ||
Sbjct 20924 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCTCCGCCTCCGTGGTGGTAT 20974
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || || ||| | |||||||| ||||| || | |||
Sbjct 21255 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 21314
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || || |||||||| || || || || || ||||||
Sbjct 21315 GATACCATTGATAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCCCCGGATCAA 21374
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| ||||| ||| | || || | || ||||||| ||||||
Sbjct 21375 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 21434
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || |||||| | ||| | || ||||| ||
Sbjct 21435 ATCCAGAAGGAATCTACTCTCCACTTGGTTCTCCGTCTTCGTGGTGGTAT 21484
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053
||| | || || || || || |||||| | || || ||||| || || ||||||| |
Sbjct 21033 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGATACC 21092
Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113
|| || | || || || ||||| ||||| || ||||| || || || || |||||
Sbjct 21093 ATCGACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGC 21152
Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173
| || | || || || ||| | |||||| | ||| || |||| ||||||||||||
Sbjct 21153 CTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGAACCCTTGCCGACTACAACATTCAA 21212
Query 27174 AAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || | ||| | || | || | || ||||| ||
Sbjct 21213 AAGGAATCTACTCTTCATCTCGTCCTCCGCCTCCGTGGTGGTAT 21256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434908386003840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |