Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq701 215 7e-51
>seq701
Length=4748
Score = 215 bits (238), Expect = 7e-51
Identities = 441/650 (68%), Gaps = 4/650 (1%)
Strand=Plus/Minus
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609
||||| || || || || ||||||| || ||| ||||| | | | ||| ||||||||
Sbjct 1985 CCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATG 1926
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
|| |||||||| ||||| || |||| || ||||| |||| | || || || ||
Sbjct 1925 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCG 1866
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
||||| ||||| | ||| || | | |||||| ||||| || || || || ||
Sbjct 1865 TGGTTCTTACGGAGATCCAAGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 1806
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | | |||| ||||| || || || ||||| || | ||| | |||||||| || |
Sbjct 1805 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1746
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|| | | ||| |||| ||| || || |||||||| || || || | || || |||
Sbjct 1745 ACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1686
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
||||||||| | | ||| || || || || ||||| || ||||| | |||
Sbjct 1685 GTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 1626
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG-AAGAAA 76968
||| || | || || ||||| ||||| ||||| || ||| |||| | || |||||
Sbjct 1625 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 1566
Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028
|| | || | ||| | ||| ||| || ||||| || | || || || ||||| ||
Sbjct 1565 CAAGAT-GATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGT 1507
Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGAT 77087
||| | || ||| | ||||||||||| || | ||| || ||||| ||
Sbjct 1506 GAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCA 1447
Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147
| || || |||| |||||||| | ||| |||||||| || || ||| ||||| | |
Sbjct 1446 G-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAA 1388
Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197
|||| | | ||||||| |||||||| || || ||||| || | ||||
Sbjct 1387 TTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 1338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712917984685440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |