Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq423 129 4e-25
seq133 129 4e-25
seq429 95.1 9e-15
>seq423
Length=39909
Score = 129 bits (142), Expect = 4e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|| |||||||| || |||||| ||||||||||| ||| | || || || | || ||
Sbjct 21691 ACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG-CGACCATCTTC 21633
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || || ||||| | |||||||||||| | || | ||| ||||| |||
Sbjct 21632 CAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTG 21573
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||| |||||| ||||| | || || |||||
Sbjct 21572 AATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTT 21513
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || ||||||||||||||||| |||||
Sbjct 21512 TCCAGTAAGGGTCTTCACGAAGATCTGCAT 21483
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| ||| |||||| || ||||||||||| | ||| ||| |||| ||
Sbjct 20953 ACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCA 20894
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || ||||| || ||||| || | || | || ||||| |||
Sbjct 20893 AGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 20834
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | || ||||||| || || ||||| | || || |||||
Sbjct 20833 ATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 20774
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || | |||||| |||||||| |||||||||
Sbjct 20773 CCGGTCAAGGTCTTGACGAAGATCTGCATGATG 20741
Score = 109 bits (120), Expect = 4e-19
Identities = 146/201 (73%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| || |||||||| |||||||| ||||| || || |||| ||
Sbjct 21235 ACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCA 21176
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||||| |||||||| || | ||| | || ||||| |||
Sbjct 21175 AGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGA 21116
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | ||||| |||| || || ||||| | || || ||||
Sbjct 21115 ATCTTCGACTTAACATTGT--CGATGGTATCGGACGACTCAACCTCAAGGGTGATGGTCT 21058
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
| || ||||||||||| ||||
Sbjct 21057 TGCCAGTGAGGGTCTTGACGA 21037
Score = 109 bits (120), Expect = 4e-19
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|||| ||| || || ||||| ||||||||||| |||| ||||| | || | || |
Sbjct 21463 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCG-GC-CATCCT 21406
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| || || ||||| | ||||| ||||| | || | ||| ||||| ||
Sbjct 21405 CAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTT 21346
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||||| | | ||||| |||| || || || |||| ||||| ||||
Sbjct 21345 GGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCT 21286
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || |||||||| ||||||||||||||
Sbjct 21285 TTCCAGTAAGGGTCTTGACGAAGATTTGCAT 21255
>seq133
Length=57550
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| |||||| ||||||||||| ||| || ||| | || ||
Sbjct 39955 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 40014
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | |||||||| || | || | || ||||| |||
Sbjct 40015 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 40074
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || |||||||| | || ||||||||
Sbjct 40075 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 40134
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||||||| ||||| || |||||
Sbjct 40135 CCCGTGAGGGTCTTGACGAAAATCTGCAT 40163
>seq429
Length=53405
Score = 95.1 bits (104), Expect = 9e-15
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| |||||||| || |||| ||| || | || || |||||||| || || ||||
Sbjct 44599 CCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 44540
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||| || || | || | || ||||| ||| ||||| ||| || |||
Sbjct 44539 TCAGTCGCTGTTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 44480
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| ||||| |||||||||||
Sbjct 44479 --CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 44422
Query 44326 GAA 44328
|||
Sbjct 44421 GAA 44419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359982318440514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |