Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq423 129 4e-25 seq133 129 4e-25 seq429 95.1 9e-15 >seq423 Length=39909 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || |||||||| || |||||| ||||||||||| ||| | || || || | || || Sbjct 21691 ACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG-CGACCATCTTC 21633 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || ||||| | |||||||||||| | || | ||| ||||| ||| Sbjct 21632 CAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTG 21573 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||| |||||| ||||| | || || ||||| Sbjct 21572 AATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTT 21513 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||||||||||||||| ||||| Sbjct 21512 TCCAGTAAGGGTCTTCACGAAGATCTGCAT 21483 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||| |||||| || ||||||||||| | ||| ||| |||| || Sbjct 20953 ACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCA 20894 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || ||||| || ||||| || | || | || ||||| ||| Sbjct 20893 AGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 20834 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||||| || || ||||| | || || ||||| Sbjct 20833 ATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 20774 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || | |||||| |||||||| ||||||||| Sbjct 20773 CCGGTCAAGGTCTTGACGAAGATCTGCATGATG 20741 Score = 109 bits (120), Expect = 4e-19 Identities = 146/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||||| |||||||| ||||| || || |||| || Sbjct 21235 ACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCA 21176 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||||| |||||||| || | ||| | || ||||| ||| Sbjct 21175 AGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGA 21116 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| || || ||||| | || || |||| Sbjct 21115 ATCTTCGACTTAACATTGT--CGATGGTATCGGACGACTCAACCTCAAGGGTGATGGTCT 21058 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | || ||||||||||| |||| Sbjct 21057 TGCCAGTGAGGGTCTTGACGA 21037 Score = 109 bits (120), Expect = 4e-19 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 |||| ||| || || ||||| ||||||||||| |||| ||||| | || | || | Sbjct 21463 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCG-GC-CATCCT 21406 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| || || ||||| | ||||| ||||| | || | ||| ||||| || Sbjct 21405 CAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTT 21346 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | ||||| |||| || || || |||| ||||| |||| Sbjct 21345 GGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCT 21286 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||||||| |||||||||||||| Sbjct 21285 TTCCAGTAAGGGTCTTGACGAAGATTTGCAT 21255 >seq133 Length=57550 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| ||| || ||| | || || Sbjct 39955 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 40014 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||||| || | || | || ||||| ||| Sbjct 40015 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 40074 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || |||||||| | || |||||||| Sbjct 40075 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 40134 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| ||||| || ||||| Sbjct 40135 CCCGTGAGGGTCTTGACGAAAATCTGCAT 40163 >seq429 Length=53405 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| |||||||| || |||| ||| || | || || |||||||| || || |||| Sbjct 44599 CCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 44540 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| ||||| || || | || | || ||||| ||| ||||| ||| || ||| Sbjct 44539 TCAGTCGCTGTTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 44480 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| ||||||||||| Sbjct 44479 --CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 44422 Query 44326 GAA 44328 ||| Sbjct 44421 GAA 44419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982318440514