Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq373 280 1e-70 seq644 165 7e-36 seq49 113 4e-20 seq239 109 5e-19 >seq373 Length=75118 Score = 280 bits (310), Expect = 1e-70 Identities = 636/954 (67%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 |||||||| ||||| || || |||||||| | |||||| | |||||| || || Sbjct 22341 GAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAA 22282 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| | || || || | || | |||||||| || || ||||| | |||| Sbjct 22281 AGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCC 22222 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | || || ||| | Sbjct 22221 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 22162 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | ||| || ||| ||| || | ||||||||||| ||||| || Sbjct 22161 TTCTGAGCCTTGATG-GTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGC 22103 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || | ||||| |||||||| ||||| || | | | |||||||| || | Sbjct 22102 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGT 22043 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || |||||||| || |||| |||||||| || ||||| || ||| || Sbjct 22042 CCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGAAA 21983 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || |||||||| || ||| |||||| | ||| | || || || Sbjct 21982 AAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAA 21923 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || | ||||| ||||||||||| | |||||| || || |||| ||| ||||| || Sbjct 21922 GACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACC 21863 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || || || ||||||||| | || | ||||| || || | ||| || || Sbjct 21862 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGA 21803 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || || | || |||| ||| || | | ||| Sbjct 21802 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACC 21743 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || || || ||||| || || || ||||| |||||||| ||||| Sbjct 21742 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 21683 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || ||||| || || | | |||||||| || || |||| ||| | | || || | Sbjct 21682 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGAGGCTGAGGGGTGCC 21623 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| || || ||| || ||||| ||| | | ||||| |||||||| || Sbjct 21622 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGT 21563 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || | | | || || || || || |||||| | | || ||||| ||||||| Sbjct 21562 CTCCAAGACTCGCTCGATATCATCACCCCATATACCAACAGACACACGCATGATCATGTG 21503 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 ||||| | |||||| | |||| ||| |||| || ||||| || | || || || Sbjct 21502 CTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 21443 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || ||||| || | || | || || || || | || ||||| || | ||| Sbjct 21442 GAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAA 21389 >seq644 Length=250981 Score = 165 bits (182), Expect = 7e-36 Identities = 546/837 (65%), Gaps = 23/837 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | || || Sbjct 138717 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCATTCTGGACTGCTGAGGAGATTGATCTC 138658 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGA-GAGAAATT--TTATTAAA 57686 || |||||||| ||| ||| | || | | |||| ||| | || || | Sbjct 138657 TCCAAGGATCTCCACGACTGGAACAACCGCCTAACTGCTGATGAGCAGTTCTTTGTCTCT 138598 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | | || || ||||| || || |||||||| || |||||||| | ||||| || Sbjct 138597 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGA 138538 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || || || | | ||||| | ||||| ||||| || || | || Sbjct 138537 TTCAGTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 138478 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | ||||| || | || || || |||||||| || ||| | ||||| || | Sbjct 138477 GAGAACATTCATTCCGAGACCTACTCCCTCCTCATCGACACATACATCAAGGAGCCCGCC 138418 Query 57867 GAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 || ||| || || |||||||| || || || || ||| ||| |||||||| || Sbjct 138417 CAGCGAACCTAT-CTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGA 138359 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGC 57982 ||| | ||| |||||| | | | || || | || ||| || | || | || Sbjct 138358 CTGGGCCATCCGATGGATCCAG---GATAAGGACTCCTCCTTTGCCCAGCGCCTCGTTGC 138302 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042 || || || || || ||||| ||||| || ||| || | || || ||| | || Sbjct 138301 CTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATCTTCTGGCTCAA 138242 Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102 ||| || || || ||||| || ||||| || ||||||| | || || || |||||||| Sbjct 138241 GAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 138182 Query 58103 TCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC----ATTGTCAATAAACCGACGC 58158 ||| || ||||| ||||| ||||| | |||||||| | ||| | | | || Sbjct 138181 TCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTCAAGGGTCGTGCCAGC-AAGC 138123 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 ||| ||| ||| || ||||| || || ||| | || || | ||||| |||||| Sbjct 138122 -AGAT--GATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTCACCG 138066 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 |||| || || ||| | ||||| |||||| ||| | ||| | |||||||||| Sbjct 138065 AAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAATACATTGAGT 138006 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 | || || || | || | ||| || | |||| ||| ||||| | | || Sbjct 138005 TCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTC--TACAAGGCCACCAA 137948 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || ||| | ||||| || | |||||||| ||||| ||||| || Sbjct 137947 CCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAA 137891 >seq49 Length=115138 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || |||||| | || || ||| | Sbjct 25277 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAATCCAGT 25218 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || ||||||||| || | || || || ||| Sbjct 25217 GACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 25158 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| ||||||| | || ||||||| || ||| Sbjct 25157 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGCGACTACAAC 25098 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || |||||||| || || || |||| | ||||| Sbjct 25097 ATCCAGAAGGAGTCAACTCTTCACCTCGTTCTCCGACTTCGCGGCGG 25051 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || || ||| |||| ||||| | || Sbjct 26016 CATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTC 25957 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| | || ||||||||| ||| | || |||||||| Sbjct 25956 CGACACTATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 25897 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || | || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 25896 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 25837 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||||||||| || || Sbjct 25836 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 25804 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || |||||| | || ||||| ||||||| | ||| Sbjct 25723 TCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGATACCATCG 25664 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| ||| | || || ||||||||||| || | Sbjct 25663 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTGA 25604 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || ||||| || || | |||||| || | ||| || ||||||||||| | Sbjct 25603 TCTTTGCTGGAAAGCAACTTGAAGACGGCCGAACCCTTGCCGACTACAACATTCAAAAGG 25544 Query 31383 AATCGACTCTTCATCTGGTACT 31404 |||| ||||||||||| || || Sbjct 25543 AATCTACTCTTCATCTCGTCCT 25522 >seq239 Length=387333 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||||||| | || || || | Sbjct 57982 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 58041 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| || | || |||||| Sbjct 58042 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGAC 58101 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||||||||| ||| | || || || ||||||| || Sbjct 58102 CAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 58161 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || ||||| || Sbjct 58162 AACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 58196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760989510320