Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq373 224 1e-53 seq644 134 2e-26 >seq373 Length=75118 Score = 224 bits (248), Expect = 1e-53 Identities = 636/966 (66%), Gaps = 32/966 (3%) Strand=Plus/Minus Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||| || || || || || || ||||| | || | | || | || ||||||||||| Sbjct 22342 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCA 22283 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 ||||| | ||||| || | || | ||| || ||||| ||| || ||||| Sbjct 22282 AAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATC 22223 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||| || || ||||| || | || || ||| |||| | || | ||| || | ||| | Sbjct 22222 CTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA- 22164 Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCTCTTTTCT--CTT-TCGTATTGT--GTATA 79853 | || ||||||| || | |||| | ||| | ||| ||||| | | ||| | Sbjct 22163 GCTTCTGAGCCTTGATGGT---CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACA 22107 Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913 | | |||||||| ||||| | ||| | | ||||| || |||| |||||||| Sbjct 22106 GAGCC--TCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACAT 22049 Query 79914 CAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 79971 || | ||| || || | || ||| || || ||||| || |||||||| |||||||| Sbjct 22048 CAGTGTCCAGTCACCGT--TCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGG 21991 Query 79972 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 80031 || | ||| ||||| | || | |||||| || || ||||| ||||| ||| Sbjct 21990 GCGAGAAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGG 21931 Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091 || | | | |||||| ||||| || || | ||| ||||| | | | || ||||| ||| Sbjct 21930 AAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 21871 Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151 || || ||||| || | || | ||| ||||| || | || | | ||| |||| || | Sbjct 21870 TTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACA 21811 Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAA 80209 ||||| |||||||| ||||| |||| ||| || ||| | ||||||||| | | | Sbjct 21810 CCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACA 21751 Query 80210 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 80269 || |||||| || || || ||||| || ||||| | || || || | ||||| | Sbjct 21750 TT--TAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGT 21693 Query 80270 AGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 80329 |||| ||||| || || || || |||| | || | || || |||| ||| | Sbjct 21692 AGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGAGGCT 21633 Query 80330 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTA 80389 || || || ||||| || | || || ||||| ||||| || | || ||||| | Sbjct 21632 GAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCA 21573 Query 80390 GATTGTACGTCTCAATAGCTGATTCTATATC------CCATTGATGAATTCCTACCGCGA 80443 ||||||| ||||| | || || ||||| |||| || || || | | Sbjct 21572 GATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAT------ATACCAACAGACA 21519 Query 80444 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAG 80503 ||||||| | |||||||||||| | || || ||||| | || || | | ||| | Sbjct 21518 CACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATG 21459 Query 80504 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 80563 || |||||||| || || ||||| || | |||| || || || || || | ||| Sbjct 21458 ATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGG 21399 Query 80564 CCGAGT 80569 | |||| Sbjct 21398 CAGAGT 21393 >seq644 Length=250981 Score = 134 bits (148), Expect = 2e-26 Identities = 364/552 (66%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||| ||||||||||| | | || || |||||||| || || || || ||||| || || Sbjct 138175 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGAGACC 138234 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || ||||| || ||||| || || | ||| |||||||| || || || || Sbjct 138235 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGC 138294 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCA-CTTTTGAG 50149 ||||||||||| || | || || | || | | || || ||||| | || | Sbjct 138295 AGCAAAGGCAACGAGGCGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGATG-G 138353 Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209 |||| || ||||||||| | || || || || || ||||| || ||||||||| || Sbjct 138354 CCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATAGGTTC 138413 Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 | || || | || || ||||| | || || | || |||||||||| Sbjct 138414 GCTGGGCGGGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTAGGTCTCGGAATGAATGT 138473 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 | || || ||||| || |||||||| || | |||||| | ||||| || || || Sbjct 138474 TCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGATCTGGACCTCGCCAC 138533 Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 ||||| || | | || || || || || || ||| ||| || || || || | | Sbjct 138534 TGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAAGCAAGGA 138593 Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCATTGATATCTT 50446 || | ||| | || | | |||| | || ||||| || | || ||| | Sbjct 138594 TGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCCAGTCGTGGAGATCCT 138653 Query 50447 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 50506 | || | ||| | || || | ||||| ||||| ||||| ||||| || ||||| | || Sbjct 138654 TGGAGAGATCAATCTCCTCAGCAGTCCAGAATGAAGCCTCAGCCTTCTTGTACATTTGCC 138713 Query 50507 AGATGTCATGAT 50518 | || | ||||| Sbjct 138714 AAATCT-ATGAT 138724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260082012440