Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq49 138 3e-27 >seq49 Length=115138 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | |||||||| || ||||| || ||||| | || |||| |||||| Sbjct 25522 AGGACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 25581 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| ||||||||||| || || | ||| || |||||||| || || || || ||| Sbjct 25582 TCAAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 25641 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || ||||| || | ||||||| | || ||||| || || || ||| Sbjct 25642 TGAATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAACCTCAAGGGTGATGGTC 25701 Query 104528 TTACCAGTAAGTGTTTTTACAAATAT 104553 || ||||| || || || || | ||| Sbjct 25702 TTGCCAGTGAGGGTCTTGACGACTAT 25727 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || | ||| ||||| || || || ||| Sbjct 25081 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAGCTGCTTACCA 25140 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| |||||||| || || || || || ||||||||| ||||| || Sbjct 25141 GCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 25199 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || || | ||| ||||| || || || ||||| ||||| || || Sbjct 25200 CACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTTTCCAGTGAGAGT 25259 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 25260 CTTCACGAAAATCTGCAT 25277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151384075524468