Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq49 93.3 4e-14 >seq49 Length=115138 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 |||||| ||| |||||| |||||||||||||||| | | || || ||||||| |||| Sbjct 25812 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCAAGCT 25870 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || |||| || || ||||| || || | | ||||||||| || | Sbjct 25871 GCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCT 25930 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | || || |||| |||||| ||||| || ||||| || |||| Sbjct 25931 TGGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGG 25990 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | | || || || || |||||||| Sbjct 25991 TCAAGGTCTTGACGAAGATCTGCAT 26015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246214886971