Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq137 113 7e-21 seq218 104 4e-18 >seq137 Length=166950 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| ||||| ||||||||||||||||| ||||| Sbjct 79622 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATTCAAGGAATCACCAAGCCCGCTAT 79680 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| |||||| Sbjct 79681 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 79721 Score = 80.6 bits (88), Expect = 4e-11 Identities = 116/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| | |||| |||||| || || |||| ||| | Sbjct 79784 TGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACG 79843 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || || || |||||||| || || ||||||||||| ||| | || ||||||| | Sbjct 79844 CTGTCACATACACTGAGCACGCCAAGCGCAAGACTGTCACATCCCTCGACGTCGTCTACG 79903 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || || || || |||| | || ||||| || ||||| Sbjct 79904 CTCTCAAGCGACAGGGACGTACCCTCTACGGTTTCGGTGGTTAA 79947 >seq218 Length=35144 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||||||||| ||||| Sbjct 15106 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 15048 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||| ||||| ||||||||| | |||| Sbjct 15047 CCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATTTCTG 15007 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| |||||| |||||| || ||| || | ||| | Sbjct 14949 TGATCTACGAGGAGACCCGCGGTGTCCTGAAGACATTCCTCGAGGGCGTCATTCGTGACG 14890 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || |||||||||||| || || || ||||| ||||| || | ||| | ||||| | Sbjct 14889 CCGTCACCTATACCGAGCATGCCAAGCGCAAGACAGTCACATCTCTCGATGTTGTCTACG 14830 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || |||||||| | |||| ||||| || ||||| Sbjct 14829 CCCTGAAGCGACAAGGCCGCACCCTTTACGGTTTCGGTGGTTAA 14786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074312207903