Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq239 87.8 2e-12 >seq239 Length=387333 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 57981 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 58040 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 58041 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGA 58100 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | || ||||| || ||||| |||| | | | | |||||||| Sbjct 58101 CCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 58160 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || |||| |||||||| Sbjct 58161 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 58196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656590235120