Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq49 95.1 1e-14 >seq49 Length=115138 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | ||||| | ||||||||| | | Sbjct 25505 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 25446 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||| ||||| || || || ||||| |||||| Sbjct 25445 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGATCAA 25386 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | || ||||||||||| || |||| | ||| | ||| || ||| Sbjct 25385 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 25326 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || |||||||| Sbjct 25325 ATCCAGAAGGAATCTAC 25309 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || ||| | || || ||| | ||| |||||||| | || || Sbjct 25709 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGATACCATCGACAATGTTAAGTCG 25650 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 |||||| ||||| || ||||| ||||| || || ||| | ||||| | | || ||| Sbjct 25649 AAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTGATCTTTGCTGGAAAG 25590 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| ||||| | | ||| | | ||| || ||||||||||| |||||||| ||||| Sbjct 25589 CAACTTGAAGACGGCCGAACCCTTGCCGACTACAACATTCAAAAGGAATCTACTCTTCAT 25530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429930912110505