Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq644 383 3e-101 seq373 293 4e-74 >seq644 Length=250981 Score = 383 bits (424), Expect = 3e-101 Identities = 602/847 (71%), Gaps = 20/847 (2%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || || |||||| || ||||||||||| || ||||||| Sbjct 138708 ATGTACAAGAAGGCTGAGGCTTCATTCTGGACTGCTGAGGAGATTGATCTCTCCAAGGAT 138649 Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423 || |||| | || || ||| | || |||| || || |||| | Sbjct 138648 CTCCACGACTGGAA--CAACCGCCTAACTGCTGATGAGCAGTTCTTTGTCTCTCACATCC 138591 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | || |||||||| |||||||| || || ||||| |||||||| | | | |||| Sbjct 138590 TTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGATTCAGTG 138531 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 ||||| ||| | |||||| || |||||||||||||||||||| || |||||| Sbjct 138530 GCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACA 138471 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603 | || || ||| ||| || || || |||| |||||| ||| |||| | |||| | Sbjct 138470 TTCATTCCGAGACCTACTCCCTCCTCATCGACACATACATCAAGGAGCCCGCCCAGCGAA 138411 Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 | || ||||| ||||| ||||| || ||||||||| |||||||| |||||||| Sbjct 138410 CCTATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCA 138351 Query 42664 TCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 || |||||| || | ||| | | || | | || | || || |||||| | || | Sbjct 138350 TCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGCCTCGTTGCCTTTGCTGCTG 138291 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTG 42782 | ||||| ||||||||| || ||||||||||||||||||||||||||| || ||| Sbjct 138290 TTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTC 138231 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || ||||| || || || ||||| ||||| |||||| | |||||||| || || | Sbjct 138230 TC-ATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACT 138172 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCGAAGGAGCGGGT 42901 ||||||||||||||||| ||| |||||| ||| | ||| | ||| || | | Sbjct 138171 GACTTTGCCTGCCTCCTCCACTC---TCACCTCAAGGGTCGTGCCAGC-AAGCAGATGAT 138116 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 || || |||||||| || ||||| || ||| ||||||||||||| | | || || Sbjct 138115 CCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTCACCGAAGCTCTTCC 138056 Query 42962 C-GTGTCCCTGGTCGGCATGAACCACGACCTCATG-TGCAAGTACATCCAGTACGTCGCC 43019 | ||| |||| ||||||||||| ||||||||| |||| ||||| ||| |||||| Sbjct 138055 CTGTG-CCCTCCTCGGCATGAACTCTGACCTCATGAAGCAA-TACATTGAGTTCGTCGCT 137998 Query 43020 GACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 || | ||||| ||| | ||| || | ||||||| | | ||||||||| Sbjct 137997 GATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG-GTCTACAAGGCCACCAACCCCTTCGA 137939 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 ||| |||||||||||||| | | |||||||||||||| ||||||||||| || ||||| Sbjct 137938 CTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGA 137879 Query 43139 CTACCAG 43145 ||||||| Sbjct 137878 CTACCAG 137872 >seq373 Length=75118 Score = 293 bits (324), Expect = 4e-74 Identities = 887/1345 (66%), Gaps = 45/1345 (3%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || ||||| ||||||| ||| | || || Sbjct 22915 GTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGG 22856 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| | |||||||| ||||| | || || ||||| ||||| || | | Sbjct 22855 CTCGAAGCACTCGTTATTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAG 22796 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA-TGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 || |||||||| | | |||||| ||| || | | || |||| |||| | Sbjct 22795 GAGAAGACTGTTACGGATGCCGTGTGTCTTGACTTC-----CT---CTCGAAG-AGTCTC 22745 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-G 244327 || ||| |||||||| | | |||| | ||||||||||||||| || | |||| | Sbjct 22744 CCAGTCCC-AGAGGTCCGAGGGCTTGACGTTCCACATGTCAAACTGGAGGATACCCTCAG 22686 Query 244328 CTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCT 244386 || ||||| |||| | |||| | ||||||||| || || ||||||| || | Sbjct 22685 ATG-CGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG 22627 Query 244387 CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT 244446 || |||||| |||| || ||||||||||||||| |||||| | || || |||| Sbjct 22626 GCAGT-GAGGGCAGCGTGATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTC 22568 Query 244447 GCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGAT 244506 | | |||||| || | || | ||| | ||||| || || || || || | Sbjct 22567 GGGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCGGCAAGGCCTTGAACACCAAG 22508 Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565 || ||||||| ||| ||| |||| | || | || | || || ||||| ||| Sbjct 22507 ACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCA 22449 Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGA 244624 | ||||| | |||||| | |||||| | | || | ||| ||| | | |||| || Sbjct 22448 CATCGATGATCTTGTTCAAGTTGCGAATAA-CAACCTGACTGACCTTGTGCAGCTTCTTG 22390 Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 |||||||| | | | || ||| | || ||| | | | || | || Sbjct 22389 AAGTCGTA---GCAAGCTTCATCGTAGTTGATGA-----AGGAGGGCAGAGACAGAGA-- 22340 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||| ||||||||||| || ||||| || | ||||| || ||| || ||||| Sbjct 22339 --GGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAA 22282 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 ||||| || |||||| || |||| || || ||| |||| ||||||||| ||| Sbjct 22281 AGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCC 22222 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 |||||||||||||| || |||||||| |||||| | || | | || ||| || Sbjct 22221 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 22162 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | |||||||| ||| ||||| |||||||||| |||||| |||||| ||| Sbjct 22161 TTCTGAGCCTTGATGGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCC 22102 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACT 244983 |||||||| || || ||| | ||||| |||||| || ||| ||||| || | Sbjct 22101 TCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACT-CGTTGGGACACATCAGTGT 22043 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || ||| | | || | || |||||| || || |||||||| ||||| | || Sbjct 22042 CCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGAAA 21983 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 || || | || | ||| ||| || |||||| | || || | || || || Sbjct 21982 AAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAA 21923 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 ||| || |||||| ||||| | ||||| || | || ||||| ||||||||||| || Sbjct 21922 GACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACC 21863 Query 245164 CTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219 |||||| | ||| | ||||| |||||||| || || |||| || | || | Sbjct 21862 CTGGTCGA-CATAC---CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCAT 21807 Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGC-CCCTGAGGTTGCTGATGGA 245277 | || |||||||| || |||||| | ||| | || | | | ||| || | Sbjct 21806 TCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTA 21747 Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 | || | || || || ||||||||| | ||| ||| |||||| || || || Sbjct 21746 GA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 21689 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397 ||||| || ||||| |||||| | | || ||||| || |||| || |||| || Sbjct 21688 TCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGAGGCTGAGG 21629 Query 245398 GCTGCACGAGTTGAACAGAGTGGGG 245422 | ||| | ||||| || |||||| Sbjct 21628 GGTGCCGGCATTGAAGAGCGTGGGG 21604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327738082960