Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq373 205 1e-47 seq644 149 7e-31 >seq373 Length=75118 Score = 205 bits (226), Expect = 1e-47 Identities = 1096/1724 (64%), Gaps = 53/1724 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 23252 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 23193 Query 113625 CCTGCTTCCAGGCATACATA-TGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 | |||||||| | | || | ||||| || | |||| | || || | |||| Sbjct 23192 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 23134 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| ||||| ||||| |||||| || ||||| || ||||| | || Sbjct 23133 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 23074 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || | | ||| ||||| ||||| |||| || ||| | ||| | ||||| Sbjct 23073 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATG 23014 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 23013 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 22954 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 113923 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 22953 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 22894 Query 113924 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 113983 ||||| || | | |||||||||| ||||| ||||| |||||||| || || ||| Sbjct 22893 GCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTATTGCCC 22834 Query 113984 AAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 114043 | || |||| ||| ||| || ||||| || || | |||||| |||||||||| || Sbjct 22833 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGAAGACTGTTACGGATGCCG 22774 Query 114044 TTTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | | | | | | | || || | | |||||||| || | | | || | | Sbjct 22773 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCCGAGGGCTTGACGT 22716 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 |||||| ||||||||||||||||| | || || || || |||| || || ||| | Sbjct 22715 TCCACATGTCAAACTGGAGGATACCCTCAGATGCGGGGGAACCCTTGAAGGTGGAGTAGG 22656 Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218 | ||||| ||| |||| | ||||| || |||||| |||||||| || |||| Sbjct 22655 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCT 22599 Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 114277 | || || | || | | |||||| || || || | | || || | | Sbjct 22598 CGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCA 22540 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | || |||| || || ||||| ||||| || ||||| || || || | ||| ||| Sbjct 22539 AGGAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 22480 Query 114338 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 || ||||| || || || || ||| |||||| | | | || | || | Sbjct 22479 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAAGTTGCGAATA 22420 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-AC 114456 ||||||| ||| | || ||||| | | | || | || || |||||| | | Sbjct 22419 ACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTA---GCAAG---CTTCATCGTAG 22366 Query 114457 ATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | | | | ||||| | || || || || || |||| | ||| || | || Sbjct 22365 TTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCA 22306 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||| |||||||| || || | || || || ||||| || | ||||||||| Sbjct 22305 CAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGG 22246 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| ||| || ||||||||||| |||||| |||| | || ||||| || ||| Sbjct 22245 TTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGG 22186 Query 114632 GACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC---CC 114687 | || ||||| || | ||| | | || | | || | ||| ||| | | || Sbjct 22185 GCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATGGTCTTGCGACCCTTGCC 22130 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 ||||| |||||||||| ||| || || || ||||| || || | || | ||| || Sbjct 22129 CTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCC 22070 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || || | || || | || | ||| | ||| || ||||||||||||||||| Sbjct 22069 AGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAA 22010 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAG-AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 || || |||||||| || || ||| || ||||| || || | || || | || | Sbjct 22009 AAGATCAGGGATCCAAAGGGC-GAGAAAAAGATCACGGGCACGGACCTCCTCCTTACCGT 21951 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926 | || ||| | || | || || | || ||| | |||||| || || ||||| | | Sbjct 21950 GGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGG 21891 Query 114927 CGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 | | | || | ||| | | ||| |||||| ||||||| || ||| || | Sbjct 21890 CAAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGA 21834 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGA 115038 | || |||||||| |||| | ||||| ||| || || || || ||| || ||| Sbjct 21833 AGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGC 21774 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 | | | || | | | || | | | ||||||||| || ||| ||| ||||| Sbjct 21773 C--AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCAT 21716 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158 || || | ||||| | ||||||| || || || ||| |||| | | | | Sbjct 21715 GGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAA 21656 Query 115159 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 |||||| |||| ||| ||| || || || || |||||||| || || | || || Sbjct 21655 GAAGCAAGATGACAATTGAGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATG 21596 Query 115219 GATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||| | | |||| |||||| || ||| ||||||||||| Sbjct 21595 CGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 21554 >seq644 Length=250981 Score = 149 bits (164), Expect = 7e-31 Identities = 310/459 (68%), Gaps = 16/459 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 137875 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 137934 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || | | | |||| |||| ||| Sbjct 137935 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 137989 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||| | ||| ||||||||||| |||| |||| Sbjct 137990 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 138049 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || |||| ||| |||||| ||||| || | ||| Sbjct 138050 GCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 138109 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | || || | | | | || | | ||| | || | || ||| || |||| Sbjct 138110 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 138166 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || ||||| ||| || ||| Sbjct 138167 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGC 138226 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | |||||| || | || | ||| ||||||||| ||| Sbjct 138227 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCC 138286 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 || ||| || || |||| ||| |||| ||||||||| Sbjct 138287 TCAACAGCAGCAAAGGCAACGAGGCGCTGGGCAAAGGAG 138325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346349620680