Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq373 214 2e-50 >seq373 Length=75118 Score = 214 bits (236), Expect = 2e-50 Identities = 1057/1668 (63%), Gaps = 36/1668 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 21425 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 21484 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 21485 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATATGGGGTGATGAT 21544 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | || ||| |||| | || |||| | | Sbjct 21545 ATCGAGCGAGTCTTGGAGACATACAATCTGATGTCTAGCAAGTTCTTCACGCATG-CTTC 21603 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 ||| || || ||||| || || ||||| ||| || |||| || || ||| || | Sbjct 21604 CCCCACGCTCTTCAATGCCGGCACCCCTCAGCCTCAATTGTCATCTTGCTTCTTGGTTGA 21663 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || ||||| | ||| | |||||| |||||| | ||||| Sbjct 21664 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 21723 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | ||| ||| |||| ||||| | || || ||| Sbjct 21724 CAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATAC 21781 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || || || || | || |||||||| || |||||||||||| Sbjct 21782 ATCGCCGGTACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 21841 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || ||||||||||| | | | ||| |||| || |||| ||| Sbjct 21842 ACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 21901 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | |||| | || || || ||||||||||| || || Sbjct 21902 GAGCCTTGGCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAG 21961 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | || || || ||| || ||| | || || ||||| ||||| || Sbjct 21962 GAGGTCCGTGCCCGTGATCTTTTTCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 22021 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| | ||||| || | |||||||| || || || || || ||||| Sbjct 22022 GTTGAAAAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGAC 22081 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | || || | |||| | ||||| | ||||||||| | Sbjct 22082 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 22141 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || | ||| |||||| ||| | || | || | ||| ||||| || Sbjct 22142 AAGACCATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGA 22201 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | ||| | | |||||| | |||| |||| |||||| || ||||||| Sbjct 22202 AACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGT 22261 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || || ||||| || ||| ||||||| | |||| |||||| | Sbjct 22262 ACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTC 22321 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674 ||||| || ||||| | ||| | ||| || | ||| | | | |||| | Sbjct 22322 GCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GAT 22372 Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAACC 94732 |||| | ||| | || |||| || | | | ||| || | || ||| Sbjct 22373 GAAGCTTGCTACGACTTCAAGAAGCTGCACAAGGT--CAGTCAGGTTGTTATTCGCAACT 22430 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 |||||| | | ||||| |||| |||||| |||| |||||| ||| ||| || Sbjct 22431 TGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGC 22490 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852 || || ||||| || | || || || || | || || || | | ||||| Sbjct 22491 GCCACCGACCCATTGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTCCTTGCTCTGCGTA 22550 Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912 |||||| ||| || ||| || | | || | | || ||||| | ||||||| Sbjct 22551 TGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATC 22610 Query 94913 ACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972 ||| ||| | | ||||| || |||| | ||| | || || || | | Sbjct 22611 ACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACCT 22667 Query 94973 TCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 || || || ||| | | | |||| || | ||||| ||| | ||| || ||||| Sbjct 22668 TCAAGGGTTCCCCC--GCATCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCC 22725 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 ||||| || | |||||||| |||| || | || || | | |||||| | || Sbjct 22726 CTCGGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAA 22785 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | || || | || || ||||| || ||| || | ||||| || ||||| ||||| Sbjct 22786 CAGTCTTCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAATAACGA 22845 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| |||| ||||||||| | ||| | | || || ||||| || || |||| Sbjct 22846 GTGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCA 22905 Query 95211 CGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| || || ||||| || || | ||||| ||||| || Sbjct 22906 GGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTA 22964 Query 95270 TCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | ||||||| | |||| | || || ||| | |||||||| || | || || Sbjct 22965 TGAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCT 23020 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || ||||||| || |||||||| || ||||||||| | |||||| Sbjct 23021 GCCGATGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 23068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717195297160